RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 PROZP22891 400 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 CCT6AP40227 531 aaKnown RBP11.58□□□□□ -0.56
TOP3A-210ENST00000580713 DPP6P42658 865 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 PTGER3P43115 390 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 AARSP49588 968 aaKnown RBP eCLIP11.58□□□□□ -0.56
TOP3A-210ENST00000580713 NLRP12P59046 1061 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 GFPT1Q06210 699 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-210ENST00000580713 STRN3Q13033 797 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 SLC39A14Q15043 492 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 ZNF174Q15697 407 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 LYSMD4Q5XG99 296 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 SLC23A3Q6PIS1 610 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 TAS1R3Q7RTX0 852 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 USP33Q8TEY7 942 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 SENP8Q96LD8 212 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 TRPC7Q9HCX4 862 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
TOP3A-210ENST00000580713 ABI2Q9NYB9 513 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-210ENST00000580713 SLC6A14Q9UN76 642 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 RAXQ9Y2V3 346 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 WNT6Q9Y6F9 365 aa11.58□□□□□ -0.56
TOP3A-210ENST00000580713 WDFY3Q8IZQ1 3526 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 ACACAQ13085 2346 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 GOLGA6L4A6NEF3 574 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 SLC16A4O15374 487 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 TOM1L1O75674 476 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 F11P03951 625 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 ITPKAP23677 461 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 P2RY2P41231 377 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 ME1P48163 572 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 HNRNPDQ14103 355 aaKnown RBP11.57□□□□□ -0.56
TOP3A-210ENST00000580713 CRY1Q16526 586 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 DUOXA1Q1HG43 343 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 HAUS3Q68CZ6 603 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 TMEM150AQ86TG1 271 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 MON1AQ86VX9 555 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 PGBD3Q8N328 593 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 FRMD1Q8N878 549 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 PNPLA1Q8N8W4 532 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 GLIS3Q8NEA6 775 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 OR10T2Q8NGX3 314 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 MDM1Q8TC05 714 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 WHAMMQ8TF30 809 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 OSCP1Q8WVF1 389 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 DRC1Q96MC2 740 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 FNBP1Q96RU3 617 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 PLEKHA5Q9HAU0 1116 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 ARHGAP28Q9P2N2 729 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 MMP17Q9ULZ9 603 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-210ENST00000580713 ZNF638Q14966 1978 aaKnown RBP11.57□□□□□ -0.56
TOP3A-210ENST00000580713 PI4KAP42356 2102 aa11.57□□□□□ -0.56
TOP3A-210ENST00000580713 PPEF2O14830 753 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 CLDN3O15551 220 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 HIP1RO75146 1068 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 PPP6R2O75170 966 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 GADD45BO75293 160 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 CKMP06732 381 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 CLTAP09496 248 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 HAPLN1P10915 354 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 CYP3A5P20815 502 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 MUTP22033 750 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 LILRA4P59901 499 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 UBE2HP62256 183 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 FAM160A1Q05DH4 1040 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 PPP2R3AQ06190 1150 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 ORC2Q13416 577 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 BYSLQ13895 437 aaKnown RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 ZNF268Q14587 947 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 TRIP6Q15654 476 aaKnown RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 ECM1Q16610 540 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 METTL23Q86XA0 190 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 THEM5Q8N1Q8 247 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 MINDY1Q8N5J2 469 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 DEFB119Q8N690 84 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 STKLD1Q8NE28 680 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 OR2I1PQ8NGU4 316 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 OLIG1Q8TAK6 271 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 CEP76Q8TAP6 659 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 ADAM32Q8TC27 787 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 SPPL2BQ8TCT7 592 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 CAMK1GQ96NX5 476 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 HELZ2Q9BYK8 2649 aaKnown RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 ZCWPW1Q9H0M4 648 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 POLMQ9NP87 494 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 PILRBQ9UKJ0 227 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-210ENST00000580713 FREM2Q5SZK8 3169 aa11.56□□□□□ -0.56
TOP3A-210ENST00000580713 ASH1LQ9NR48 2969 aaKnown RBP11.55□□□□□ -0.56
TOP3A-210ENST00000580713 TTC26A0AVF1 554 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 ANTXRLA6NF34 631 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 SFI1A8K8P3 1242 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 LACTBL1A8MY62 500 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 K7EQS6 105 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 SH3BP5O60239 455 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 KLF8O95600 359 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-210ENST00000580713 SERPINF2P08697 491 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 OR52Z1P0C646 297 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 USP17L7P0C7H9 530 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms