RNA–Protein interactions for RNA: ENST00000580617.5

NCOR1-220, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 1,352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-220ENST00000580617 NELL2Q99435 816 aa11.15□□□□□ -0.63
NCOR1-220ENST00000580617 OBP2AQ9NY56 170 aa11.15□□□□□ -0.63
NCOR1-220ENST00000580617 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.63
NCOR1-220ENST00000580617 ATG2BQ96BY7 2078 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MYO16Q9Y6X6 1858 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 EP300Q09472 2414 aaPredicted RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 WDR87Q6ZQQ6 2873 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 PRR23AA6NEV1 266 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MAN2B1O00754 1011 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 DPYSL4O14531 572 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 PHACTR2O75167 634 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 ZNF202O95125 648 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 C4BPAP04003 597 aaKnown RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 ATICP31939 592 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 GNL1P36915 607 aaPredicted RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MAGEA11P43364 429 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 SOX9P48436 509 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 AP3M2P53677 418 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 CYP27A1Q02318 531 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 ARHGAP29Q52LW3 1261 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MDH1BQ5I0G3 518 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 TAF3Q5VWG9 929 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 CEP135Q66GS9 1140 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 TXNDC8Q6A555 127 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 ASCL5Q7RTU5 278 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 SCN4BQ8IWT1 228 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 CMTM8Q8IZV2 173 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MAB21L3Q8N8X9 362 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 OR6B3Q8NGW1 331 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MYCBPAPQ8TBZ2 947 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 BPIFB1Q8TDL5 484 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 CSGALNACT1Q8TDX6 532 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 FAM3CQ92520 227 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 CCDC47Q96A33 483 aaKnown RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 SYAP1Q96A49 352 aaPredicted RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 ELMO3Q96BJ8 720 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 TRMT2BQ96GJ1 504 aaKnown RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 PCED1BQ96HM7 432 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 SNX25Q9H3E2 840 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 DPEP3Q9H4B8 488 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 SPATA6Q9NWH7 488 aaPredicted RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MAGEC2Q9UBF1 373 aaPredicted RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 NDRG2Q9UN36 371 aaKnown RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MAPK8IP1Q9UQF2 711 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 CCL26Q9Y258 94 aa11.14□□□□□ -0.63
NCOR1-220ENST00000580617 MRPS17Q9Y2R5 130 aaKnown RBP11.14□□□□□ -0.63
NCOR1-220ENST00000580617 SPTBN4Q9H254 2564 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 ZNF292O60281 2723 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 OTOGLQ3ZCN5 2332 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 CALUO43852 315 aaPredicted RBP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 CLSTN1O94985 981 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 VNN1O95497 513 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 FAM163BP0C2L3 166 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 SP9P0CG40 484 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 BDNFP23560 247 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 DDX6P26196 483 aaKnown RBP eCLIP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 AVPR1AP37288 418 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 MAGEA9P43362 315 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 RPS9P46781 194 aaKnown RBP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 TNK2Q07912 1038 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 NCOA4Q13772 614 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 KCNB1Q14721 858 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 MAPRE1Q15691 268 aaKnown RBP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 ZNF699Q32M78 642 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 MON1AQ86VX9 555 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 CELF5Q8N6W0 485 aaKnown RBP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 TTC8Q8TAM2 541 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 MRPS31Q92665 395 aaKnown RBP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 USP13Q92995 863 aaPredicted RBP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 NKD2Q969F2 451 aaPredicted RBP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 SMYD3Q9H7B4 428 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 VRTNQ9H8Y1 702 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 GTSE1Q9NYZ3 720 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 UXTQ9UBK9 157 aaPredicted RBP11.13□□□□□ -0.63
NCOR1-220ENST00000580617 ZMYM5Q9UJ78 669 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 R4GN57 208 aa11.13□□□□□ -0.63
NCOR1-220ENST00000580617 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 SOBPA7XYQ1 873 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 A8MXQ7 604 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 NCAM2O15394 837 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 MBD3O95983 291 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 PTPN1P18031 435 aaKnown RBP11.12□□□□□ -0.63
NCOR1-220ENST00000580617 NR2F2P24468 414 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 CCNE1P24864 410 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 GRIK1P39086 918 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 KPNA1P52294 538 aaPredicted RBP11.12□□□□□ -0.63
NCOR1-220ENST00000580617 CACNA2D1P54289 1103 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 MLLT6P55198 1093 aaPredicted RBP11.12□□□□□ -0.63
NCOR1-220ENST00000580617 CDH8P55286 799 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 PNOCQ13519 176 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 NFIL3Q16649 462 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 ZACNQ401N2 412 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 ZNF667Q5HYK9 610 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 SCARA5Q6ZMJ2 495 aa11.12□□□□□ -0.63
NCOR1-220ENST00000580617 SV2AQ7L0J3 742 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms