RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ARL14EPQ8N8R7 260 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 LRRC15Q8TF66 581 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 FAM124BQ9H5Z6 455 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 ANKMY1Q9P2S6 941 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 KCNJ14Q9UNX9 436 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 SLCO1B1Q9Y6L6 691 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 UTP20O75691 2785 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 A0A1B0GVT2 93 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 C2orf78A6NCI8 922 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 MEI4A8MW99 385 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 FLRT2O43155 660 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 BRINP1O60477 761 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 DTNBO60941 627 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 NDUFS2O75306 463 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 LYPLA2O95372 231 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 NFATC1O95644 943 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 ADSSP30520 456 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 TUFMP49411 452 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 TARDBPQ13148 414 aaKnown RBP eCLIP15.24■□□□□ 0.033e-6■■■■□ 20.8
CSNK1D-213ENST00000580446 LRRTM3Q86VH5 581 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 MIB1Q86YT6 1006 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 SNIP1Q8TAD8 396 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 ZNF419Q96HQ0 510 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 ZBTB45Q96K62 511 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 PNKPQ96T60 521 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 TARS2Q9BW92 718 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 C22orf23Q9BZE7 217 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 ARHGEF4Q9NR80 690 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 SUSD2Q9UGT4 822 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 TNFSF13BQ9Y275 285 aa15.24■□□□□ 0.03
CSNK1D-213ENST00000580446 LRRK2Q5S007 2527 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 FAM205CA6NFA0 338 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 TNFSF14O43557 240 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 APODP05090 189 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 HAPLN1P10915 354 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 HOXB2P14652 356 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 DDX6P26196 483 aaKnown RBP eCLIP15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 TNFSF9P41273 254 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 NAMPTP43490 491 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 CCT2P78371 535 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 ZXDBP98169 803 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 SLC10A6Q3KNW5 377 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 C6orf132Q5T0Z8 1188 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 SYCP2LQ5T4T6 812 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 BRF1Q92994 677 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 ACO2Q99798 780 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 ZDHHC5Q9C0B5 715 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 HCN2Q9UL51 889 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 RAD54BQ9Y620 910 aa15.23■□□□□ 0.03
CSNK1D-213ENST00000580446 TRAV19A0A0A6YYK7 116 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 A0A1B0GTW7 788 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 MYMKA6NI61 221 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 CER1O95813 267 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 MYF5P13349 255 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 RHDQ02161 417 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 NFATC3Q12968 1075 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 RESTQ13127 1097 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 LAYNQ6UX15 382 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 NEK8Q86SG6 692 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 TMPRSS12Q86WS5 348 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 ERICH1Q86X53 443 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 ZNF513Q8N8E2 541 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 MCPH1Q8NEM0 835 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 TTC9Q92623 222 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 FGF11Q92914 225 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 TMEM176AQ96HP8 235 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 NACC1Q96RE7 527 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 ACOX2Q99424 681 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 LGMNQ99538 433 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 TCHPQ9BT92 498 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 ZCWPW1Q9H0M4 648 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 ANO2Q9NQ90 1003 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 PAXBP1Q9Y5B6 917 aa15.22■□□□□ 0.03
CSNK1D-213ENST00000580446 A0A1W2PQF6 199 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 E9PAM4 449 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 TRIM24O15164 1050 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 USP17L7P0C7H9 530 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 CXCL8P10145 99 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 AARSP49588 968 aaKnown RBP eCLIP15.21■□□□□ 0.035e-7■■■■■ 34.9
CSNK1D-213ENST00000580446 DNAJC3Q13217 504 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 DDR2Q16832 855 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 EARS2Q5JPH6 523 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 WDR45BQ5MNZ6 344 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 KIAA1614Q5VZ46 1190 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 HIST2H2BCQ6DN03 193 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 PADI6Q6TGC4 694 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 KIAA1324Q6UXG2 1013 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 APBB1IPQ7Z5R6 666 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 NAT16Q8N8M0 369 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 PI4K2AQ9BTU6 479 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 PTPRHQ9HD43 1115 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 SH3GLB2Q9NR46 395 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 TMLHEQ9NVH6 421 aa15.21■□□□□ 0.03
CSNK1D-213ENST00000580446 CABIN1Q9Y6J0 2220 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms