RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 SPATA17Q96L03 361 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 ZSWIM3Q96MP5 696 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 SRRTQ9BXP5 876 aaKnown RBP25.47■■□□□ 1.67
LIMD2-207ENST00000579329 B3GNT5Q9BYG0 378 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 SLC2A4RGQ9NR83 387 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 FBXL21Q9UKT6 434 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 PTPRDP23468 1912 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 CACNA1HO95180 2353 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 FCARP24071 287 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 PTPN5P54829 565 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 CYP4F8P98187 520 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 GPR158Q5T848 1215 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 TANGO2Q6ICL3 276 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 ACOT1Q86TX2 421 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 C8orf48Q96LL4 319 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 ZNF518BQ9C0D4 1074 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 TRPV4Q9HBA0 871 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 HMGXB4Q9UGU5 601 aa25.46■■□□□ 1.67
LIMD2-207ENST00000579329 F11P03951 625 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 CFHP08603 1231 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 FMO5P49326 533 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 MARSP56192 900 aaKnown RBP25.45■■□□□ 1.66
LIMD2-207ENST00000579329 NLRP12P59046 1061 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 STXBP5Q5T5C0 1151 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 SUGP1Q8IWZ8 645 aaKnown RBP25.45■■□□□ 1.66
LIMD2-207ENST00000579329 CRYBG2Q8N1P7 616 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 GPT2Q8TD30 523 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 MYRFLQ96LU7 910 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 MED10Q9BTT4 135 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 DNAI2Q9GZS0 605 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 TASP1Q9H6P5 420 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 WNT16Q9UBV4 365 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 ZMYM5Q9UJ78 669 aa25.45■■□□□ 1.66
LIMD2-207ENST00000579329 F8VP50 259 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 CLDN5O00501 218 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 CCDC192P0DO97 292 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 TCF15Q12870 199 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 ORC1Q13415 861 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 FAM35AQ86V20 835 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 TRIM59Q8IWR1 403 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 FBXL6Q8N531 539 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 TTC39CQ8N584 583 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 E2F7Q96AV8 911 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 NT5C1AQ9BXI3 368 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 DACH1Q9UI36 760 aa25.44■■□□□ 1.66
LIMD2-207ENST00000579329 PMM2O15305 246 aa25.43■■□□□ 1.66
LIMD2-207ENST00000579329 CILPO75339 1184 aa25.43■■□□□ 1.66
LIMD2-207ENST00000579329 CD58P19256 250 aa25.43■■□□□ 1.66
LIMD2-207ENST00000579329 DDX6P26196 483 aaKnown RBP eCLIP25.43■■□□□ 1.66
LIMD2-207ENST00000579329 GPC5P78333 572 aa25.43■■□□□ 1.66
LIMD2-207ENST00000579329 DENND5BQ6ZUT9 1274 aa25.43■■□□□ 1.66
LIMD2-207ENST00000579329 TMEM150AQ86TG1 271 aa25.43■■□□□ 1.66
LIMD2-207ENST00000579329 MRPS31Q92665 395 aaKnown RBP25.43■■□□□ 1.66
LIMD2-207ENST00000579329 PLA2G2FQ9BZM2 168 aa25.43■■□□□ 1.66
LIMD2-207ENST00000579329 FAM124BQ9H5Z6 455 aaPredicted RBP25.43■■□□□ 1.66
LIMD2-207ENST00000579329 EHD2Q9NZN4 543 aa25.43■■□□□ 1.66
LIMD2-207ENST00000579329 P4HA2O15460 535 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 CETN1Q12798 172 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 DPCR1Q3MIW9 517 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 DEPDC1BQ8WUY9 529 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 TATDN2Q93075 761 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 SMARCD1Q96GM5 515 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 TWNKQ96RR1 684 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 PRRX2Q99811 253 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 MFSD1Q9H3U5 465 aa25.42■■□□□ 1.66
LIMD2-207ENST00000579329 SOBPA7XYQ1 873 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 MBD3O95983 291 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 PDGFBP01127 241 aaPredicted RBP25.41■■□□□ 1.66
LIMD2-207ENST00000579329 CCDC130P13994 396 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 WEE1P30291 646 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 VIPR2P41587 438 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 CACNA2D1P54289 1103 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 PFKPQ01813 784 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 VITQ6UXI7 678 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 PAQR9Q6ZVX9 377 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 ARID3BQ8IVW6 561 aaPredicted RBP25.41■■□□□ 1.66
LIMD2-207ENST00000579329 FUKQ8N0W3 1084 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 SIX5Q8N196 739 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 WHAMMQ8TF30 809 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 MED15Q96RN5 788 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 DMAP1Q9NPF5 467 aaPredicted RBP25.41■■□□□ 1.66
LIMD2-207ENST00000579329 KRT82Q9NSB4 513 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 FAM49BQ9NUQ9 324 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 TMEM30AQ9NV96 361 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 CA14Q9ULX7 337 aa25.41■■□□□ 1.66
LIMD2-207ENST00000579329 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.41■■□□□ 1.66
LIMD2-207ENST00000579329 ZFHX2Q9C0A1 2572 aaPredicted RBP25.4■■□□□ 1.66
LIMD2-207ENST00000579329 CFAP54Q96N23 3096 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 TADA3O75528 432 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 KCNH2Q12809 1159 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 GRM2Q14416 872 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 TPD52L1Q16890 204 aaPredicted RBP25.4■■□□□ 1.66
LIMD2-207ENST00000579329 SLC2A14Q8TDB8 520 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 CNOT6LQ96LI5 555 aaKnown RBP25.4■■□□□ 1.66
LIMD2-207ENST00000579329 ARID3AQ99856 593 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 TRMT61BQ9BVS5 477 aaKnown RBP25.4■■□□□ 1.66
LIMD2-207ENST00000579329 TTLL2Q9BWV7 592 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 SLC46A2Q9BY10 475 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 CISHQ9NSE2 258 aa25.4■■□□□ 1.66
LIMD2-207ENST00000579329 NUP210Q8TEM1 1887 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms