RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ASIC4Q96FT7 647 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 SPATA17Q96L03 361 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 SLITRK1Q96PX8 696 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 NT5C1AQ9BXI3 368 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 B3GNT5Q9BYG0 378 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 NIF3L1Q9GZT8 377 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 CLSTN2Q9H4D0 955 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 VRTNQ9H8Y1 702 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 ARHGEF3Q9NR81 526 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 FAM49BQ9NUQ9 324 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 TRPM5Q9NZQ8 1165 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 DACH1Q9UI36 760 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 ZMYM5Q9UJ78 669 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 SIT1Q9Y3P8 196 aa6.97□□□□□ -1.29
TRAF4-213ENST00000578917 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.97□□□□□ -1.29
TRAF4-213ENST00000578917 CITO14578 2027 aa6.96□□□□□ -1.29
TRAF4-213ENST00000578917 ZFHX2Q9C0A1 2572 aaPredicted RBP6.96□□□□□ -1.29
TRAF4-213ENST00000578917 TRAV19A0A0A6YYK7 116 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 PES1O00541 588 aaKnown RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 RTN3O95197 1032 aaPredicted RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 FAM200BP0CF97 657 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 CCDC130P13994 396 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 HMGA1P17096 107 aaKnown RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 HDCP19113 662 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 BMP6P22004 513 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 DDX6P26196 483 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 YWHAQP27348 245 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 ASPAP45381 313 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 PDE6CP51160 858 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 CLCN5P51795 746 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 MAP3K7CLP57077 242 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 YWHAEP62258 255 aaKnown RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 UBXN2BQ14CS0 331 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 TXNDC8Q6A555 127 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 TTI2Q6NXR4 508 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 ZNF852Q6ZMS4 543 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 MON1AQ86VX9 555 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 TMC8Q8IU68 726 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 MFSD6LQ8IWD5 586 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 NUP93Q8N1F7 819 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 CRYBG2Q8N1P7 616 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 CELF5Q8N6W0 485 aaKnown RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 C12orf29Q8N999 325 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 TTC8Q8TAM2 541 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 SLC2A14Q8TDB8 520 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 DEPDC1BQ8WUY9 529 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 SEMA4DQ92854 862 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 TATDN2Q93075 761 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 JAKMIP2Q96AA8 810 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 CYFIP2Q96F07 1278 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 SMARCD1Q96GM5 515 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 C8orf48Q96LL4 319 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 CEP295NLQ96MC4 621 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 CYP2S1Q96SQ9 504 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 NELL2Q99435 816 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 PKMYT1Q99640 499 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 PRRX2Q99811 253 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 DUSP9Q99956 384 aaKnown RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 SLC46A2Q9BY10 475 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 LRRC3Q9BY71 257 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 PLA2G2FQ9BZM2 168 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 ZNF518BQ9C0D4 1074 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 NACA2Q9H009 215 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 SMG9Q9H0W8 520 aaKnown RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 SDCBP2Q9H190 292 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 TBC1D17Q9HA65 648 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 DMAP1Q9NPF5 467 aaPredicted RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 SLC2A4RGQ9NR83 387 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 TDP1Q9NUW8 608 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 CHORDC1Q9UHD1 332 aaPredicted RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 RWDD2AQ9UIY3 292 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 MRPS17Q9Y2R5 130 aaKnown RBP6.96□□□□□ -1.3
TRAF4-213ENST00000578917 MUC6Q6W4X9 2439 aa6.96□□□□□ -1.3
TRAF4-213ENST00000578917 KRBA1A5PL33 1030 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 FAM170BA6NMN3 283 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 MAN2B1O00754 1011 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 NCAM2O15394 837 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 MOSPD3O75425 235 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 NOL4O94818 638 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 AFPP02771 609 aaKnown RBP6.95□□□□□ -1.3
TRAF4-213ENST00000578917 F11P03951 625 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 USP17L7P0C7H9 530 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 CD19P15391 556 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 CD72P21854 359 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 MTIF2P46199 727 aaKnown RBP6.95□□□□□ -1.3
TRAF4-213ENST00000578917 PPP3CCP48454 512 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 FMO5P49326 533 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 PRKCQQ04759 706 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 MLF2Q15773 248 aaPredicted RBP6.95□□□□□ -1.3
TRAF4-213ENST00000578917 CBWD6Q4V339 395 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 ARHGAP29Q52LW3 1261 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 CBWD3Q5JTY5 395 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 CBWD5Q5RIA9 395 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 SASS6Q6UVJ0 657 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 VITQ6UXI7 678 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 CLEC17AQ6ZS10 378 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 TPRG1Q6ZUI0 275 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 FAM35AQ86V20 835 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 FAM114A1Q8IWE2 563 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms