RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 RNF19BQ6ZMZ0 732 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 C12orf29Q8N999 325 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 KREMEN2Q8NCW0 462 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MSANTD4Q8NCY6 345 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CEP295NLQ96MC4 621 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PGLYRP2Q96PD5 576 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 NOX5Q96PH1 765 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TMEM209Q96SK2 561 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PKMYT1Q99640 499 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SEPT5Q99719 369 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 DMAP1Q9NPF5 467 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 EHD2Q9NZN4 543 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 AIPL1Q9NZN9 384 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 FBXW11Q9UKB1 542 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TSPAN16Q9UKR8 245 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 NME7Q9Y5B8 376 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MTCH2Q9Y6C9 303 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 C2orf16Q68DN1 1984 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 OBSL1O75147 1896 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 XIRP2A4UGR9 3374 aa11.95□□□□□ -0.5
CDK5RAP3-210ENST00000578733 M0QYV0 167 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 AP1G2O75843 785 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SERPING1P05155 500 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PNMA6AP0CW24 399 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CCDC130P13994 396 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 BRD2P25440 801 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PRKCIP41743 596 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 EPHB3P54753 998 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CDR2Q01850 454 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 BST2Q10589 180 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ADGRE1Q14246 886 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 VEPH1Q14D04 833 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CCDC85BQ15834 202 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TAF12Q16514 161 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 GOLGA7BQ2TAP0 167 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MGAT5BQ3V5L5 792 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TCEAL5Q5H9L2 206 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PPP1R26Q5T8A7 1209 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ADGRD2Q7Z7M1 963 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ITIH5Q86UX2 942 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 FAM35AQ86V20 835 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LRRTM3Q86VH5 581 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SLC47A2Q86VL8 602 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TCEAL8Q8IYN2 117 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MICALL1Q8N3F8 863 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 EFHBQ8N7U6 833 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ANKRD52Q8NB46 1076 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SPC24Q8NBT2 197 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 DUSP16Q9BY84 665 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 B3GNT5Q9BYG0 378 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 DEF6Q9H4E7 631 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 IGFLR1Q9H665 355 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MAN1C1Q9NR34 630 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 KRT82Q9NSB4 513 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ABHD10Q9NUJ1 306 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SEPT11Q9NVA2 429 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PCDHGC3Q9UN70 934 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HCFC2Q9Y5Z7 792 aa11.94□□□□□ -0.5
CDK5RAP3-210ENST00000578733 O00370 1275 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PER2O15055 1255 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ADAM12O43184 909 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 XYLBO75191 536 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LSM8O95777 96 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 C8AP07357 584 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HNRNPA1P09651 372 aaKnown RBP eCLIP11.93□□□□□ -0.58e-6■□□□□ 10.1
CDK5RAP3-210ENST00000578733 HAPLN1P10915 354 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 BMP1P13497 986 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 NPR3P17342 541 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 BDNFP23560 247 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 DUSP4Q13115 394 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PPM1LQ5SGD2 360 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LLGL2Q6P1M3 1020 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LILRA6Q6PI73 481 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SCN4BQ8IWT1 228 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 FUKQ8N0W3 1084 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 EPS8L1Q8TE68 723 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PDLIM2Q96JY6 352 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 C8orf48Q96LL4 319 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 DNAJC7Q99615 494 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 AGPAT1Q99943 283 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ZNF518BQ9C0D4 1074 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MIS12Q9H081 205 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PNPLA8Q9NP80 782 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TMLHEQ9NVH6 421 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ZDHHC7Q9NXF8 308 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ASB3Q9Y575 518 aa11.93□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ANAPC1Q9H1A4 1944 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 XPO1O14980 1071 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MICAL2O94851 1124 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 EPCAMP16422 314 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CYP2F1P24903 491 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HOXA9P31269 272 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HNRNPH3P31942 346 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms