RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 TADA3O75528 432 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 PRPF6O94906 941 aaKnown RBP13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 KRT19P08727 400 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 DRD1P21728 446 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 FAM160A1Q05DH4 1040 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 MYO1EQ12965 1108 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 SURF1Q15526 300 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 SDHAF4Q5VUM1 108 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 TRIM68Q6AZZ1 485 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 PKN3Q6P5Z2 889 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 FAM171BQ6P995 826 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 SHC4Q6S5L8 630 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 STXBP4Q6ZWJ1 553 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 LIMS2Q7Z4I7 341 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 SPATA2LQ8IUW3 424 aaPredicted RBP13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 ADGRF2Q8IZF7 708 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 RIN3Q8TB24 985 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 EXOC4Q96A65 974 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 ANKRD36BP1Q96IX9 119 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 MTMR12Q9C0I1 747 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 LRRC27Q9C0I9 530 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 INTS13Q9NVM9 706 aa13.46□□□□□ -0.25
SMARCD2-207ENST00000578234 ZNF233A6NK53 670 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 RPP40O75818 363 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 USP17L7P0C7H9 530 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 ARSAP15289 507 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 MAGEA11P43364 429 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 GALK1P51570 392 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 MTF1Q14872 753 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 SF3A2Q15428 464 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 DUOXA2Q1HG44 320 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 FBXO43Q4G163 708 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 C4orf50Q6ZRC1 276 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 OSTM1Q86WC4 334 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 TTC30AQ86WT1 665 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 CAMKK1Q8N5S9 505 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 GAB3Q8WWW8 586 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 HPDLQ96IR7 371 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 LOXL4Q96JB6 756 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 CEP295NLQ96MC4 621 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 CYP2S1Q96SQ9 504 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 KIAA1586Q9HCI6 787 aa13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 FBRSL1Q9HCM7 1045 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-207ENST00000578234 TRAV19A0A0A6YYK7 116 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 ATP2C2O75185 946 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 EGFP01133 1207 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 TNNC2P02585 160 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 CKMP06732 381 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 GJA4P35212 333 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 MAPRE1Q15691 268 aaKnown RBP13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 ZNF77Q15935 545 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 VSTM1Q6UX27 236 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 CACNA2D4Q7Z3S7 1137 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 SCN4BQ8IWT1 228 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 CPA6Q8N4T0 437 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 OR5B17Q8NGF7 314 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 OSCP1Q8WVF1 389 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 ATP2A3Q93084 1043 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 FAM84AQ96KN4 292 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 SPATA17Q96L03 361 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 SLC22A12Q96S37 553 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 P2RY13Q9BPV8 354 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 SCAND2PQ9GZW5 306 aaPredicted RBP13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 TNMDQ9H2S6 317 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 CUEDC2Q9H467 287 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 SMOC1Q9H4F8 434 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 ECT2Q9H8V3 914 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 KBTBD4Q9NVX7 518 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 POLR3BQ9NW08 1133 aaPredicted RBP13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 DUS2Q9NX74 493 aaKnown RBP13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 GCNT4Q9P109 453 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 MAGEC2Q9UBF1 373 aaPredicted RBP13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 CDH9Q9ULB4 789 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 ANAPC1Q9H1A4 1944 aa13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 CNOT1A5YKK6 2376 aaKnown RBP13.44□□□□□ -0.26
SMARCD2-207ENST00000578234 PTPRJQ12913 1337 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 ACACBO00763 2458 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 HCRTO43612 131 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 RNF40O75150 1001 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 AKAP3O75969 853 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 CLSTN1O94985 981 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 TCF3P15923 654 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 PFKLP17858 780 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 HDCP19113 662 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 LMO2P25791 158 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 HOXD13P35453 343 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 RAP1GAPP47736 663 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 AMPD3Q01432 767 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 USP4Q13107 963 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 E2F4Q16254 413 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 ST3GAL2Q16842 350 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 CCDC142Q17RM4 750 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 LMBRD2Q68DH5 695 aaPredicted RBP13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 CNNM4Q6P4Q7 775 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 KBTBD6Q86V97 674 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 CBWD2Q8IUF1 395 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
SMARCD2-207ENST00000578234 ARL14EPQ8N8R7 260 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms