RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 MBD3O95983 291 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
CCDC57-211ENST00000578187 HLA-DRAP01903 254 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 ACAT1P24752 427 aaKnown RBP13.64□□□□□ -0.23
CCDC57-211ENST00000578187 TARSP26639 723 aaKnown RBP13.64□□□□□ -0.23
CCDC57-211ENST00000578187 PCSK1P29120 753 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 CDC25CP30307 473 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 PIK3CAP42336 1068 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 TSPY1Q01534 308 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 SGSM1Q2NKQ1 1148 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 DNAJB7Q7Z6W7 309 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-211ENST00000578187 FILIP1Q7Z7B0 1213 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 LRRTM3Q86VH5 581 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 TTC9BQ8N6N2 239 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 MLKLQ8NB16 471 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 ATAD1Q8NBU5 361 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 SPPL2BQ8TCT7 592 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 FAM3CQ92520 227 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 CLDN23Q96B33 292 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 MMS19Q96T76 1030 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 MRPL45Q9BRJ2 306 aaKnown RBP13.64□□□□□ -0.23
CCDC57-211ENST00000578187 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-211ENST00000578187 RWDD2AQ9UIY3 292 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 ZMYM5Q9UJ78 669 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 NDRG2Q9UN36 371 aaKnown RBP13.64□□□□□ -0.23
CCDC57-211ENST00000578187 NME7Q9Y5B8 376 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 PIAS3Q9Y6X2 628 aa13.64□□□□□ -0.23
CCDC57-211ENST00000578187 HCRTO43612 131 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 MOSPD3O75425 235 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 GABRR2P28476 465 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 VIPR2P41587 438 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 MXI1P50539 228 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 KPNA1P52294 538 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 NRLP54845 237 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 MLLT6P55198 1093 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 STX17P56962 302 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 NFE2Q16621 373 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 DPCR1Q3MIW9 517 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 KRT39Q6A163 491 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 TMC8Q8IU68 726 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 TAS1R2Q8TE23 839 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 RUBCNQ92622 972 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 SLC35C1Q96A29 364 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 MED15Q96RN5 788 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 FAM126AQ9BYI3 521 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 DNAJC25Q9H1X3 360 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 SMYD3Q9H7B4 428 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 MMRN2Q9H8L6 949 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 METTL14Q9HCE5 456 aaKnown RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 TMLHEQ9NVH6 421 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 THG1LQ9NWX6 298 aaKnown RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 ZSCAN32Q9NX65 697 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 NXF1Q9UBU9 619 aaKnown RBP13.63□□□□□ -0.23
CCDC57-211ENST00000578187 CDH9Q9ULB4 789 aa13.63□□□□□ -0.23
CCDC57-211ENST00000578187 VPS13AQ96RL7 3174 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 NUP210Q8TEM1 1887 aaPredicted RBP13.62□□□□□ -0.23
CCDC57-211ENST00000578187 CHADO15335 359 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 LMO2P25791 158 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 ASPAP45381 313 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 ID4P47928 161 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 NLRP12P59046 1061 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 NOP14P78316 857 aaKnown RBP13.62□□□□□ -0.23
CCDC57-211ENST00000578187 LRRC32Q14392 662 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 CCDC142Q17RM4 750 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 ARHGAP29Q52LW3 1261 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 GPR158Q5T848 1215 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 TCERG1LQ5VWI1 586 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 FAM171BQ6P995 826 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 ELMO3Q96BJ8 720 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 SYT15Q9BQS2 421 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 SDCBP2Q9H190 292 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 C8orf33Q9H7E9 229 aaPredicted RBP13.62□□□□□ -0.23
CCDC57-211ENST00000578187 ABCB6Q9NP58 842 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 OBP2AQ9NY56 170 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 ABI2Q9NYB9 513 aaPredicted RBP13.62□□□□□ -0.23
CCDC57-211ENST00000578187 NCDNQ9UBB6 729 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 COQ4Q9Y3A0 265 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 PCDHB5Q9Y5E4 795 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 COL4A3Q01955 1670 aa13.62□□□□□ -0.23
CCDC57-211ENST00000578187 CFAP54Q96N23 3096 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 ZFHX2Q9C0A1 2572 aaPredicted RBP13.61□□□□□ -0.23
CCDC57-211ENST00000578187 TICRRQ7Z2Z1 1910 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 MYBPHLA2RUH7 354 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 SOAT2O75908 522 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 GNA14O95837 355 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 HAPLN1P10915 354 aaPredicted RBP13.61□□□□□ -0.23
CCDC57-211ENST00000578187 P4HA1P13674 534 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 ATF6P18850 670 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 RAP1GAPP47736 663 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 CCR3P51677 355 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 FCHO2Q0JRZ9 810 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 CFAP221Q4G0U5 840 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 CBWD6Q4V339 395 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms