RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 KRT33BQ14525 404 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 FOXR2Q6PJQ5 311 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 FAM71DQ8N9W8 422 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TFB1MQ8WVM0 346 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 WNK4Q96J92 1243 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 PRDM16Q9HAZ2 1276 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 VTI1BQ9UEU0 232 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 PRR12Q9ULL5 1215 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 PCDHGC5Q9Y5F6 944 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 PMS1P54277 932 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ARPP19P56211 112 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ANKS3Q6ZW76 656 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ATXN7L3BQ96GX2 97 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TMEM120AQ9BXJ8 343 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 AVENQ9NQS1 362 aaPredicted RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 PRDM4Q9UKN5 801 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ZMYND8Q9ULU4 1186 aaPredicted RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ZSCAN9O15535 394 aaPredicted RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 PYGMP11217 842 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 CYP11B1P15538 503 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 GEMP55040 296 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 NTRK3Q16288 839 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 UGT3A1Q6NUS8 523 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 MTDHQ86UE4 582 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 KYQ8NBH2 561 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 FAM153AQ9UHL3 310 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TBX20Q9UMR3 447 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 RAD54BQ9Y620 910 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TAF6LQ9Y6J9 622 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ATP9AO75110 1047 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 CPA2P48052 419 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 ACOT2P49753 483 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 CDK7P50613 346 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 DRG2P55039 364 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TP53BP2Q13625 1128 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 LUZP2Q86TE4 346 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 PDCD6IPQ8WUM4 868 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 SPON2Q9BUD6 331 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 CCDC28BQ9BUN5 200 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 CTNNAL1Q9UBT7 734 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 MAGEB16A2A368 324 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 DFFAO00273 331 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 HMGB3O15347 200 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TSHRP16473 764 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 AQP5P55064 265 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 TATDN2Q93075 761 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 PHACTR1Q9C0D0 580 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 NAALADL1Q9UQQ1 740 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 AAR2Q9Y312 384 aaKnown RBP11.14□□□□□ -0.63
SEC22B-201ENST00000578049 SNX9Q9Y5X1 595 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 DUSP10Q9Y6W6 482 aa11.14□□□□□ -0.63
SEC22B-201ENST00000578049 SOX6P35712 828 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 COG2Q14746 738 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 TJAP1Q5JTD0 557 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 MRNIPQ6NTE8 343 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 OSCP1Q8WVF1 389 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 PHF21AQ96BD5 680 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 LRRC39Q96DD0 335 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 ECSITQ9BQ95 431 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 CFAP99D6REC4 459 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 NCAM2O15394 837 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 ZC2HC1CQ53FD0 456 aaPredicted RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 RNPEPL1Q9HAU8 725 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 BTBD7Q9P203 1132 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 SLC39A10Q9ULF5 831 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 RPS6KL1Q9Y6S9 549 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 NFIBO00712 420 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 FKBP9O95302 570 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 SERPINE1P05121 402 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 SLC2A3P11169 496 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 SPP2Q13103 211 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 PRKAA1Q13131 559 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 GSTA3Q16772 222 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 AARS2Q5JTZ9 985 aaKnown RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 FKBP9P1Q75LS8 142 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 ZNF571Q7Z3V5 609 aaPredicted RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 UNC45BQ8IWX7 931 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 USP13Q92995 863 aaPredicted RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 TRIM63Q969Q1 353 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 DCUN1D1Q96GG9 259 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 PRR23D1E9PI22 279 aaPredicted RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 SASH3O75995 380 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 PRR23D2P0DMB1 279 aaPredicted RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 SKIV2L2P42285 1042 aaKnown RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 CACNB3P54284 484 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 VCPP55072 806 aaKnown RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 ERVK-9P63128 1117 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 SV2CQ496J9 727 aa11.13□□□□□ -0.63
SEC22B-201ENST00000578049 LMBRD2Q68DH5 695 aaPredicted RBP11.13□□□□□ -0.63
SEC22B-201ENST00000578049 MTMR8Q96EF0 704 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms