RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 GCNAQ96QF7 691 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 ZNF518BQ9C0D4 1074 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 ATXN3LQ9H3M9 355 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 IL21Q9HBE4 155 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 SLC38A8A6NNN8 435 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 CLDN5O00501 218 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 CILPO75339 1184 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 AFPP02771 609 aaKnown RBP23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 TRIM21P19474 475 aaKnown RBP23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 ANXA13P27216 316 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 CDC25CP30307 473 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 HOXD11P31277 338 aaPredicted RBP23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 NHLH1Q02575 133 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 KCNH2Q12809 1159 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 SLC44A3Q8N4M1 653 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 TTC39CQ8N584 583 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 SPATA17Q96L03 361 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 CEP295NLQ96MC4 621 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 TWNKQ96RR1 684 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 MED10Q9BTT4 135 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 NT5C1AQ9BXI3 368 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 GPR88Q9GZN0 384 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 KCNH6Q9H252 994 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 THAP9Q9H5L6 903 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 SLITRK6Q9H5Y7 841 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 MAGED2Q9UNF1 606 aaPredicted RBP23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 DUSP12Q9UNI6 340 aa23.59■■□□□ 1.37
SMARCD2-206ENST00000577990 ARHGAP15Q53QZ3 475 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 FAM35AQ86V20 835 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 IRF2BP1Q8IU81 584 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 CREBRFQ8IUR6 639 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 WHAMMQ8TF30 809 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 TRMT2BQ96GJ1 504 aaKnown RBP23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 C8orf48Q96LL4 319 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 ZSWIM3Q96MP5 696 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 ARID3AQ99856 593 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 DNAI2Q9GZS0 605 aa23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 FAM124BQ9H5Z6 455 aaPredicted RBP23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 UXTQ9UBK9 157 aaPredicted RBP23.58■■□□□ 1.37
SMARCD2-206ENST00000577990 F8VP50 259 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 CACNA2D1P54289 1103 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 LRMPQ12912 555 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 CUL2Q13617 745 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 FAM78AQ5JUQ0 283 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 SASS6Q6UVJ0 657 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 PAQR9Q6ZVX9 377 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 FUKQ8N0W3 1084 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 SMARCD2Q92925 531 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 MYRFLQ96LU7 910 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 ASB16Q96NS5 453 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 NT5C1BQ96P26 610 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 KXD1Q9BQD3 176 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 RPP25Q9BUL9 199 aaKnown RBP23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 CISHQ9NSE2 258 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 GREB1Q4ZG55 1949 aa23.57■■□□□ 1.36
SMARCD2-206ENST00000577990 NARSO43776 548 aaKnown RBP23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 ECI2O75521 394 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 CCDC130P13994 396 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 AVPR2P30518 371 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 CYP4F8P98187 520 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 STXBP5Q5T5C0 1151 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 GPR158Q5T848 1215 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 DENND5BQ6ZUT9 1274 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 FAM114A1Q8IWE2 563 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 C12orf29Q8N999 325 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 ZSCAN18Q8TBC5 510 aaPredicted RBP23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 SLC2A14Q8TDB8 520 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 SMARCD1Q96GM5 515 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 KRT82Q9NSB4 513 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 FAM49BQ9NUQ9 324 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 TMEM30AQ9NV96 361 aa23.56■■□□□ 1.36
SMARCD2-206ENST00000577990 F11P03951 625 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 FCARP24071 287 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 TBXAS1P24557 533 aaPredicted RBP23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 MTIF2P46199 727 aaKnown RBP23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 YWHAEP62258 255 aaKnown RBP23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 TANGO2Q6ICL3 276 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 TMEM150AQ86TG1 271 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 LMO3Q8TAP4 145 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 ELSPBP1Q96BH3 223 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 TASP1Q9H6P5 420 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 ZFP14Q9HCL3 533 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 ANO10Q9NW15 660 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 TMEM63CQ9P1W3 806 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 DENND4CQ5VZ89 1909 aa23.55■■□□□ 1.36
SMARCD2-206ENST00000577990 OBSL1O75147 1896 aa23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 AP1G2O75843 785 aa23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 SRFP11831 508 aa23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 ZNF394Q53GI3 561 aa23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 ALYREFQ86V81 257 aaKnown RBP23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 EHBP1Q8NDI1 1231 aa23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 HNRNPABQ99729 332 aaKnown RBP23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 TRPV4Q9HBA0 871 aa23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 DMAP1Q9NPF5 467 aaPredicted RBP23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 EHD2Q9NZN4 543 aa23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 ZMYM5Q9UJ78 669 aa23.54■■□□□ 1.36
SMARCD2-206ENST00000577990 TADA3O75528 432 aa23.53■■□□□ 1.36
SMARCD2-206ENST00000577990 DDX6P26196 483 aaKnown RBP eCLIP23.53■■□□□ 1.36
SMARCD2-206ENST00000577990 TCF15Q12870 199 aa23.53■■□□□ 1.36
SMARCD2-206ENST00000577990 STX1AQ16623 288 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms