RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CATSPER2Q96P56 530 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 NT5C1AQ9BXI3 368 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CACYBPQ9HB71 228 aaKnown RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 KCNMB3Q9NPA1 279 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 METTL5Q9NRN9 209 aaKnown RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 THAP1Q9NVV9 213 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 GID8Q9NWU2 228 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 HACD3Q9P035 362 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 KIAA1257Q9ULG3 409 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CLEC11AQ9Y240 323 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 F8W8V4 182 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 ACADSBP45954 432 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 QPCTQ16769 361 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 RIN3Q8TB24 985 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 EPS8L1Q8TE68 723 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 NCLNQ969V3 563 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CGRRF1Q99675 332 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 MMTAG2Q9BU76 263 aaKnown RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 KCTD10Q9H3F6 313 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 ETAA1Q9NY74 926 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 DNAJC16Q9Y2G8 782 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 GAS2O43903 313 aaKnown RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 PTDSS1P48651 473 aaKnown RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 SYCP2LQ5T4T6 812 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 ZFP1Q6P2D0 407 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 KNDC1Q76NI1 1749 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 ARHGEF19Q8IW93 802 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 LINC00116Q8NCU8 138 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 ATXN7L3BQ96GX2 97 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CHST7Q9NS84 486 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CYP3A7-CYP3A51PA0A087WV96 503 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 FSCN2O14926 492 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 TIMM44O43615 452 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 MGRN1O60291 552 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 KDM1AO60341 852 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CYP3A7P24462 503 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 NOP9Q86U38 636 aaKnown RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 FAM151AQ8WW52 585 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CCDC28BQ9BUN5 200 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CCDC90BQ9GZT6 254 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 NRDE2Q9H7Z3 1164 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 AGAP1Q9UPQ3 857 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 DRG1Q9Y295 367 aaKnown RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 SDR42E2A6NKP2 422 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 H0Y626 953 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 PDE5AO76074 875 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 TRIM16O95361 564 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 HSD17B4P51659 736 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 SPP2Q13103 211 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 BAATQ14032 418 aaPredicted RBP10.77□□□□□ -0.68
PTPRM-205ENST00000577827 COG2Q14746 738 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 CBWD6Q4V339 395 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 CBWD3Q5JTY5 395 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 CBWD5Q5RIA9 395 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 IER5Q5VY09 327 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 DSTYKQ6XUX3 929 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 NR1H4Q96RI1 486 aaPredicted RBP10.77□□□□□ -0.68
PTPRM-205ENST00000577827 TARS2Q9BW92 718 aaKnown RBP10.77□□□□□ -0.68
PTPRM-205ENST00000577827 CAAP1Q9H8G2 361 aa10.77□□□□□ -0.68
PTPRM-205ENST00000577827 MON2Q7Z3U7 1717 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 C2CD2LO14523 706 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 RASSF9O75901 435 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 TOMM70O94826 608 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 SLITRK3O94933 977 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 TNFAIP8O95379 198 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 APOA1P02647 267 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 ICAM1P05362 532 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 CYP3A4P08684 503 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 SERPINB8P50452 374 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 NUP107P57740 925 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 TPI1P60174 286 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 LRRC38Q5VT99 294 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 GPR141Q7Z602 305 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 DDHD1Q8NEL9 900 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 CALML6Q8TD86 181 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 SPIRE2Q8WWL2 714 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 TLCD1Q96CP7 247 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 KIF12Q96FN5 646 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 CNBD2Q96M20 576 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 KIAA1683Q9H0B3 1180 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 C3P01024 1663 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 C5orf60A6NFR6 353 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 SPDYE16A6NNV3 312 aaPredicted RBP10.77□□□□□ -0.69
PTPRM-205ENST00000577827 RALBP11234 206 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 RGS2P41220 211 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 TMED10P49755 219 aaKnown RBP10.77□□□□□ -0.69
PTPRM-205ENST00000577827 NEK2P51955 445 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 SPDYE2Q495Y8 402 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 OTOP1Q7RTM1 612 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 GLIS3Q8NEA6 775 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 B4GALNT2Q8NHY0 566 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 SEPT1Q8WYJ6 367 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 HAS1Q92839 578 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 LRRC39Q96DD0 335 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 CNPY3Q9BT09 278 aa10.77□□□□□ -0.69
PTPRM-205ENST00000577827 TEX13BQ9BXU2 312 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms