RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 SPATA17Q96L03 361 aa15.21■□□□□ 0.03
SMARCD2-205ENST00000577686 STRA6Q9BX79 667 aa15.21■□□□□ 0.03
SMARCD2-205ENST00000577686 MTMR12Q9C0I1 747 aa15.21■□□□□ 0.03
SMARCD2-205ENST00000577686 PANK4Q9NVE7 773 aa15.21■□□□□ 0.03
SMARCD2-205ENST00000577686 WNT6Q9Y6F9 365 aa15.21■□□□□ 0.03
SMARCD2-205ENST00000577686 KIF26AQ9ULI4 1882 aaPredicted RBP15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 TCHHQ07283 1943 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 MYMKA6NI61 221 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 GRIK1P39086 918 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 CCDC6Q16204 474 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 DUOXA2Q1HG44 320 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 EML3Q32P44 896 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 ARL14EPQ8N8R7 260 aaPredicted RBP15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 CHFRQ96EP1 664 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 HPDLQ96IR7 371 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 EDEM2Q9BV94 578 aa15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 FBXO2Q9UK22 296 aaPredicted RBP15.2■□□□□ 0.02
SMARCD2-205ENST00000577686 GOLGA8IPA6NC78 632 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 OTOL1A6NHN0 477 aaPredicted RBP15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 GOLGA8JA6NMD2 632 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 GABRDO14764 452 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 TADA3O75528 432 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 KRT37O76014 449 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 PRPF6O94906 941 aaKnown RBP15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 CAVIN2O95810 425 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 DPP6P42658 865 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 SHC2P98077 582 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 AMPD3Q01432 767 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 CYP27A1Q02318 531 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 PREPLQ4J6C6 727 aaPredicted RBP15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 DNAJC19Q96DA6 116 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 SPACA7Q96KW9 195 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 SLITRK1Q96PX8 696 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 MMS19Q96T76 1030 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 PKMYT1Q99640 499 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 LSM14BQ9BX40 385 aaKnown RBP15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 DUSP15Q9H1R2 295 aaPredicted RBP15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 SNX25Q9H3E2 840 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 PCIF1Q9H4Z3 704 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 PDE11AQ9HCR9 933 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 INTS13Q9NVM9 706 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 CLIC4Q9Y696 253 aa15.19■□□□□ 0.02
SMARCD2-205ENST00000577686 FRMD3A2A2Y4 597 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 BCLAF3A2AJT9 711 aaKnown RBP15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 KHNYNO15037 678 aaKnown RBP15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 FAM163BP0C2L3 166 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 PMLP29590 882 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 KCNA1Q09470 495 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 BYSLQ13895 437 aaKnown RBP15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 SOWAHAQ2M3V2 549 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 HSF5Q4G112 596 aaPredicted RBP15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 N4BP2L1Q5TBK1 243 aaPredicted RBP15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 FAM171BQ6P995 826 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 NUDT18Q6ZVK8 323 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 CYP2U1Q7Z449 544 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 OSTM1Q86WC4 334 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 WDR49Q8IV35 697 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 STKLD1Q8NE28 680 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 MYLPFQ96A32 169 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 CNOT6LQ96LI5 555 aaKnown RBP15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 FNBP1Q96RU3 617 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 CYP2S1Q96SQ9 504 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 IKZF4Q9H2S9 585 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 GCNT4Q9P109 453 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 MORC2Q9Y6X9 1032 aaPredicted RBP15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 ACACBO00763 2458 aa15.18■□□□□ 0.02
SMARCD2-205ENST00000577686 ATP8B3O60423 1300 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 SCN1AP35498 2009 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 CACNA1BQ00975 2339 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 ANK1P16157 1881 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 KCNK5O95279 499 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 CD2BP2O95400 341 aaKnown RBP15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 ADH1CP00326 375 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 WARSP23381 471 aaKnown RBP15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 TNNC1P63316 161 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 MRPS21P82921 87 aaKnown RBP15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 TDRD10Q5VZ19 366 aaKnown RBP15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 USP49Q70CQ1 688 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 PDZD8Q8NEN9 1154 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 ELOVL4Q9GZR5 314 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 TNMDQ9H2S6 317 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 CUEDC2Q9H467 287 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 FBRSL1Q9HCM7 1045 aaKnown RBP15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 POLMQ9NP87 494 aaPredicted RBP15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 SIX4Q9UIU6 781 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 MMP17Q9ULZ9 603 aa15.17■□□□□ 0.02
SMARCD2-205ENST00000577686 EPG5Q9HCE0 2579 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 GREB1Q4ZG55 1949 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 C2orf78A6NCI8 922 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 LEFTY2O00292 366 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 TM4SF5O14894 197 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 EIF3DO15371 548 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 APODP05090 189 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 BDNFP23560 247 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 EIF2DP41214 584 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms