RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 SIK3Q9Y2K2 1263 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 USP15Q9Y4E8 981 aaPredicted RBP13.14□□□□□ -0.31
RARA-208ENST00000577646 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 PLXNA3P51805 1871 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 MED7O43513 233 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 RFPL2O75678 378 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 RTN3O95197 1032 aaPredicted RBP13.13□□□□□ -0.31
RARA-208ENST00000577646 IL9P15248 144 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 BDNFP23560 247 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 CYP2F1P24903 491 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 GRIK1P39086 918 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 PLA2G5P39877 138 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 PPP3CCP48454 512 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 UBASH3AP57075 661 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
RARA-208ENST00000577646 PTK2Q05397 1052 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 TWF1Q12792 350 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 SYCP1Q15431 976 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 TAF12Q16514 161 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 FIGNQ5HY92 759 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 DPY19L2P1Q6NXN4 242 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 MYRFLQ96LU7 910 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 SEPT5Q99719 369 aaPredicted RBP13.13□□□□□ -0.31
RARA-208ENST00000577646 ARID3AQ99856 593 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 NUP58Q9BVL2 599 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 PHF7Q9BWX1 381 aaPredicted RBP13.13□□□□□ -0.31
RARA-208ENST00000577646 NAA15Q9BXJ9 866 aaKnown RBP13.13□□□□□ -0.31
RARA-208ENST00000577646 GPR88Q9GZN0 384 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 DPEP3Q9H4B8 488 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
RARA-208ENST00000577646 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.13□□□□□ -0.31
RARA-208ENST00000577646 HESX1Q9UBX0 185 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 RAPGEFL1Q9UHV5 662 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 NR2E1Q9Y466 385 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 CLUHO75153 1309 aa13.13□□□□□ -0.31
RARA-208ENST00000577646 CCDC172P0C7W6 258 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 FAM200BP0CF97 657 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 PAQR9Q6ZVX9 377 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 OTOP3Q7RTS5 596 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 DNAJB7Q7Z6W7 309 aaPredicted RBP13.12□□□□□ -0.31
RARA-208ENST00000577646 FAM35AQ86V20 835 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 GJD3Q8N144 294 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 C12orf76Q8N812 135 aaPredicted RBP13.12□□□□□ -0.31
RARA-208ENST00000577646 RBBP8NLQ8NC74 664 aaPredicted RBP13.12□□□□□ -0.31
RARA-208ENST00000577646 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 ELMO3Q96BJ8 720 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 ACSF2Q96CM8 615 aaPredicted RBP13.12□□□□□ -0.31
RARA-208ENST00000577646 FAM122AQ96E09 287 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 PCMTD1Q96MG8 357 aaPredicted RBP13.12□□□□□ -0.31
RARA-208ENST00000577646 TWNKQ96RR1 684 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 LSM14BQ9BX40 385 aaKnown RBP13.12□□□□□ -0.31
RARA-208ENST00000577646 C1QTNF1Q9BXJ1 281 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 CRISPLD1Q9H336 500 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 ASAH2Q9NR71 780 aa13.12□□□□□ -0.31
RARA-208ENST00000577646 CCL16O15467 120 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 AP1G2O75843 785 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 NOL4O94818 638 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 SETSIPP0DME0 302 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 KRT5P13647 590 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 NPR3P17342 541 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 PFKLP17858 780 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 CDC25CP30307 473 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 ZNF394Q53GI3 561 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 DENND5BQ6ZUT9 1274 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 ZNF677Q86XU0 584 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 SCN4BQ8IWT1 228 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 NUP93Q8N1F7 819 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 OVCA2Q8WZ82 227 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 TTLL2Q9BWV7 592 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 NUCKS1Q9H1E3 243 aaKnown RBP13.11□□□□□ -0.31
RARA-208ENST00000577646 GANQ9H2C0 597 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 FBXO44Q9H4M3 255 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 GDE1Q9NZC3 331 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 IL37Q9NZH6 218 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 DNMT3BQ9UBC3 853 aaKnown RBP13.11□□□□□ -0.31
RARA-208ENST00000577646 HMGXB4Q9UGU5 601 aa13.11□□□□□ -0.31
RARA-208ENST00000577646 SLC38A8A6NNN8 435 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 O00370 1275 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
RARA-208ENST00000577646 HCRTO43612 131 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 RHOP08100 348 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 CD19P15391 556 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 ATF6P18850 670 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 FSHRP23945 695 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 DDX6P26196 483 aaKnown RBP eCLIP13.1□□□□□ -0.31
RARA-208ENST00000577646 WEE1P30291 646 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 STAT1P42224 750 aa13.1□□□□□ -0.31
RARA-208ENST00000577646 BCAT1P54687 386 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms