RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 DENND4CQ5VZ89 1909 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SLC38A8A6NNN8 435 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 BECN2A8MW95 431 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 F8VP50 259 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 AP1G2O75843 785 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 NOL4O94818 638 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FAM200BP0CF97 657 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 LAMP2P13473 410 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CCDC130P13994 396 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CEBPBP17676 345 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CDK11BP21127 795 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GABRR2P28476 465 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GPR15P49685 360 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 KRT31Q15323 416 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 NFKBIBQ15653 356 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SLC5A9Q2M3M2 681 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZSCAN23Q3MJ62 389 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZNF394Q53GI3 561 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ARHGAP15Q53QZ3 475 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FKBP15Q5T1M5 1219 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 DENND5BQ6ZUT9 1274 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MTSS1LQ765P7 747 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 RNF135Q8IUD6 432 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 NPAS3Q8IXF0 933 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FUKQ8N0W3 1084 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 UBR7Q8N806 425 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ITFG1Q8TB96 612 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SLC2A14Q8TDB8 520 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ING5Q8WYH8 240 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 NXPE3Q969Y0 559 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TRMT2BQ96GJ1 504 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TMEM176AQ96HP8 235 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 HEXIM2Q96MH2 286 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 HNRNPABQ99729 332 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 FUCA2Q9BTY2 467 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 LRRC3Q9BY71 257 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SLITRK6Q9H5Y7 841 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TAB2Q9NYJ8 693 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 IGSF9Q9P2J2 1179 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 APEX2Q9UBZ4 518 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PCDHB4Q9Y5E5 795 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZDBF2Q9HCK1 2354 aa13.49□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CLDN5O00501 218 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 RTN3O95197 1032 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PAEPP09466 180 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZNF18P17022 549 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 RFX1P22670 979 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ADORA2BP29275 332 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 RAD23BP54727 409 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MFAP3P55082 362 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SLC8A3P57103 927 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TPM4P67936 248 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 NCAPHQ15003 741 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SGO2Q562F6 1265 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ARHGAP17Q68EM7 881 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TMEM270Q6UE05 265 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 RRAGAQ7L523 313 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ARHGEF19Q8IW93 802 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 C12orf29Q8N999 325 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SLC4A11Q8NBS3 891 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SHKBP1Q8TBC3 707 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 GPR152Q8TDT2 470 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TCEAL4Q96EI5 215 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CYFIP2Q96F07 1278 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MYRFLQ96LU7 910 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ATXN3LQ9H3M9 355 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ZNF334Q9HCZ1 680 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 LIMA1Q9UHB6 759 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 KIAA1257Q9ULG3 409 aa13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MAGED2Q9UNF1 606 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-203ENST00000577442 A0A1W2PRU2 124 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 ALADP13716 330 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CD19P15391 556 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 HMGA1P17096 107 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 DDX6P26196 483 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PON1P27169 355 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CCR2P41597 374 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 COPB1P53618 953 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 STILQ15468 1287 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TEAD2Q15562 447 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PHLDB3Q6NSJ2 640 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PAQR9Q6ZVX9 377 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 RBBP8NLQ8NC74 664 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 MRPS31Q92665 395 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 TTLL2Q9BWV7 592 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 IL21Q9HBE4 155 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PNPLA8Q9NP80 782 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 UBE2TQ9NPD8 197 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 CD320Q9NPF0 282 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 COMMD8Q9NX08 183 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SORCS3Q9UPU3 1222 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 PATJQ8NI35 1801 aa13.47□□□□□ -0.25
CDK5RAP3-203ENST00000577442 OBSL1O75147 1896 aa13.46□□□□□ -0.25
CDK5RAP3-203ENST00000577442 F5P12259 2224 aa13.46□□□□□ -0.25
CDK5RAP3-203ENST00000577442 SOBPA7XYQ1 873 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms