RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 GAP43P17677 238 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 BCKDHBP21953 392 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 GARTP22102 1010 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 OPRD1P41143 372 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 GRSF1Q12849 480 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRPF8-215ENST00000576958 PSMD2Q13200 908 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 POSTNQ15063 836 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 E2F4Q16254 413 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 FOXD4L6Q3SYB3 417 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-215ENST00000576958 AASDHQ4L235 1098 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-215ENST00000576958 FAM171BQ6P995 826 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 FOXD4L3Q6VB84 417 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-215ENST00000576958 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 C12orf40Q86WS4 652 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 GPD1LQ8N335 351 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 LRRC52Q8N7C0 313 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 FRMD1Q8N878 549 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 OSCP1Q8WVF1 389 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 MYRFLQ96LU7 910 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 RNF38Q9H0F5 515 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 DUSP15Q9H1R2 295 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-215ENST00000576958 OLFML3Q9NRN5 406 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 INTS13Q9NVM9 706 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 SMPD4Q9NXE4 827 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 GDAP2Q9NXN4 497 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 SEL1LQ9UBV2 794 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 ITGA11Q9UKX5 1188 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 SLC8A2Q9UPR5 921 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-215ENST00000576958 ASPMQ8IZT6 3477 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 CEP295Q9C0D2 2601 aa12.89□□□□□ -0.35
PRPF8-215ENST00000576958 PATE3B3GLJ2 98 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 TM4SF5O14894 197 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 GIPC1O14908 333 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 TGFB1I1O43294 461 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 CKMP06732 381 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
PRPF8-215ENST00000576958 SCP2P22307 547 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 HOXA6P31267 233 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 PNPLA4P41247 253 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 SLC6A11P48066 632 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 CASP4P49662 377 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 RBP5P82980 135 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 FAM160A1Q05DH4 1040 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
PRPF8-215ENST00000576958 SLC39A14Q15043 492 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
PRPF8-215ENST00000576958 PLK5Q496M5 336 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
PRPF8-215ENST00000576958 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 CCDC33Q8N5R6 958 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 TOP6BLQ8N6T0 577 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 ZNF516Q92618 1163 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 WBP2Q969T9 261 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 ERLEC1Q96DZ1 483 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 TRMT2BQ96GJ1 504 aaKnown RBP12.88□□□□□ -0.35
PRPF8-215ENST00000576958 PCED1BQ96HM7 432 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 HPDLQ96IR7 371 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 HSPBP1Q9NZL4 362 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 EXOC7Q9UPT5 735 aa12.88□□□□□ -0.35
PRPF8-215ENST00000576958 TRAV19A0A0A6YYK7 116 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 F8VP50 259 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 K7EQS6 105 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 PAX3P23760 479 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRPF8-215ENST00000576958 CNR2P34972 360 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 MPLP40238 635 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 IFNAR2P48551 515 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 PGFP49763 221 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 CYP2J2P51589 502 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
PRPF8-215ENST00000576958 MYL7Q01449 175 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 SMARCB1Q12824 385 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 DMC1Q14565 340 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 ZNF268Q14587 947 aaPredicted RBP12.87□□□□□ -0.35
PRPF8-215ENST00000576958 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 C2orf27AQ580R0 203 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 PLA2G2CQ5R387 149 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 CC2D1AQ6P1N0 951 aaPredicted RBP12.87□□□□□ -0.35
PRPF8-215ENST00000576958 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 EPM2AIP1Q7L775 607 aaPredicted RBP12.87□□□□□ -0.35
PRPF8-215ENST00000576958 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 TMEM86AQ8N2M4 240 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 SYNPOQ8N3V7 929 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 CD101Q93033 1021 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 CCDC127Q96BQ5 260 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 DHX58Q96C10 678 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 CHAMP1Q96JM3 812 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 ZNF518BQ9C0D4 1074 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 KIF9Q9HAQ2 790 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 PCDHB13Q9Y5F0 798 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms