RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 GPC5P78333 572 aa25■■□□□ 1.59
SNF8-217ENST00000576353 INCA1Q0VD86 236 aa25■■□□□ 1.59
SNF8-217ENST00000576353 ACOT1Q86TX2 421 aa25■■□□□ 1.59
SNF8-217ENST00000576353 SOBPA7XYQ1 873 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 LRRN2O75325 713 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 DDX6P26196 483 aaKnown RBP eCLIP24.99■■□□□ 1.593e-6■□□□□ 10
SNF8-217ENST00000576353 PFKPQ01813 784 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 CETN1Q12798 172 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 STXBP5Q5T5C0 1151 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 MRPS31Q92665 395 aaKnown RBP24.99■■□□□ 1.59
SNF8-217ENST00000576353 MED10Q9BTT4 135 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 NT5C1AQ9BXI3 368 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 PLA2G2FQ9BZM2 168 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 ZNF518BQ9C0D4 1074 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 MFSD1Q9H3U5 465 aa24.99■■□□□ 1.59
SNF8-217ENST00000576353 FAM124BQ9H5Z6 455 aaPredicted RBP24.99■■□□□ 1.59
SNF8-217ENST00000576353 F8VP50 259 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 CLDN5O00501 218 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 PMM2O15305 246 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 CCDC192P0DO97 292 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 COL9A1P20849 921 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 WEE1P30291 646 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 FMO5P49326 533 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 MARSP56192 900 aaKnown RBP24.98■■□□□ 1.59
SNF8-217ENST00000576353 CYP4F8P98187 520 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 DENND5BQ6ZUT9 1274 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 TMEM150AQ86TG1 271 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 ARID3BQ8IVW6 561 aaPredicted RBP24.98■■□□□ 1.59
SNF8-217ENST00000576353 SIX5Q8N196 739 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 STKLD1Q8NE28 680 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 HMGXB4Q9UGU5 601 aa24.98■■□□□ 1.59
SNF8-217ENST00000576353 TRIOO75962 3097 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 CILPO75339 1184 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 PSMC3P17980 439 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 CD58P19256 250 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 VIPR2P41587 438 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 DEPDC1BQ8WUY9 529 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 TRMT61BQ9BVS5 477 aaKnown RBP24.97■■□□□ 1.59
SNF8-217ENST00000576353 SLC46A2Q9BY10 475 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 DACH1Q9UI36 760 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 HCN4Q9Y3Q4 1203 aa24.97■■□□□ 1.59
SNF8-217ENST00000576353 DPYSL4O14531 572 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 P4HA2O15460 535 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 PDGFBP01127 241 aaPredicted RBP24.96■■□□□ 1.59
SNF8-217ENST00000576353 ORC1Q13415 861 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 FAM35AQ86V20 835 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 MFSD6LQ8IWD5 586 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 TRIM59Q8IWR1 403 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 TATDN2Q93075 761 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 SMARCD1Q96GM5 515 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 OBP2AQ9NY56 170 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 CA14Q9ULX7 337 aa24.96■■□□□ 1.59
SNF8-217ENST00000576353 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.96■■□□□ 1.59
SNF8-217ENST00000576353 HEPACAM2A8MVW5 462 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 VITQ6UXI7 678 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 PAQR9Q6ZVX9 377 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 MON1AQ86VX9 555 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 CMTM8Q8IZV2 173 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 FUKQ8N0W3 1084 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 GPT2Q8TD30 523 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 SLC2A14Q8TDB8 520 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 SHDQ96IW2 340 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 DMAP1Q9NPF5 467 aaPredicted RBP24.95■■□□□ 1.58
SNF8-217ENST00000576353 ARHGEF3Q9NR81 526 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 CISHQ9NSE2 258 aa24.95■■□□□ 1.58
SNF8-217ENST00000576353 AVPR1AP37288 418 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 CACNA2D1P54289 1103 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 GRM2Q14416 872 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 YAF2Q8IY57 180 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 MAB21L3Q8N8X9 362 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 C12orf29Q8N999 325 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 FLCNQ8NFG4 579 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 WHAMMQ8TF30 809 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 IRF7Q92985 503 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 TWNKQ96RR1 684 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 TTLL2Q9BWV7 592 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 BRD9Q9H8M2 597 aa24.94■■□□□ 1.58
SNF8-217ENST00000576353 KRBA1A5PL33 1030 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 AP1G2O75843 785 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 CCDC130P13994 396 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 RFX1P22670 979 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 TBXAS1P24557 533 aaPredicted RBP24.93■■□□□ 1.58
SNF8-217ENST00000576353 ERCC5P28715 1186 aaPredicted RBP24.93■■□□□ 1.58
SNF8-217ENST00000576353 PPP3CCP48454 512 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 CLCN5P51795 746 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 YWHAEP62258 255 aaKnown RBP24.93■■□□□ 1.58
SNF8-217ENST00000576353 KCNH2Q12809 1159 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 CUL2Q13617 745 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 TPD52L1Q16890 204 aaPredicted RBP24.93■■□□□ 1.58
SNF8-217ENST00000576353 DPCR1Q3MIW9 517 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 CT47A1Q5JQC4 288 aaPredicted RBP24.93■■□□□ 1.58
SNF8-217ENST00000576353 TXNDC8Q6A555 127 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 NUP93Q8N1F7 819 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 DNASE1L2Q92874 299 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 CYFIP2Q96F07 1278 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 MED15Q96RN5 788 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 KCNK16Q96T55 309 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 HNRNPABQ99729 332 aaKnown RBP24.93■■□□□ 1.58
SNF8-217ENST00000576353 KRT82Q9NSB4 513 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 FAM49BQ9NUQ9 324 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms