RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 PFKPQ01813 784 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 CCDC183Q5T5S1 534 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 TANGO2Q6ICL3 276 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 DENND5BQ6ZUT9 1274 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 TMEM150AQ86TG1 271 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 ACOT1Q86TX2 421 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 SCN4BQ8IWT1 228 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 ZSCAN18Q8TBC5 510 aaPredicted RBP14.44□□□□□ -0.1
CIITA-210ENST00000575513 GPR152Q8TDT2 470 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 PBXIP1Q96AQ6 731 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 ELMO3Q96BJ8 720 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 MED15Q96RN5 788 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 RPP25Q9BUL9 199 aaKnown RBP14.44□□□□□ -0.1
CIITA-210ENST00000575513 TTLL2Q9BWV7 592 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 OBP2AQ9NY56 170 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 TECTAO75443 2155 aa14.44□□□□□ -0.1
CIITA-210ENST00000575513 LRRN2O75325 713 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 GJA1P17302 382 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 PFKLP17858 780 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 FCARP24071 287 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 TBXAS1P24557 533 aaPredicted RBP14.43□□□□□ -0.1
CIITA-210ENST00000575513 KCNH2Q12809 1159 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 HFE2Q6ZVN8 426 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 PAQR9Q6ZVX9 377 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 MFSD6LQ8IWD5 586 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 FUKQ8N0W3 1084 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 WHAMMQ8TF30 809 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 DEPDC1BQ8WUY9 529 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 SMARCD1Q96GM5 515 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 HNRNPABQ99729 332 aaKnown RBP14.43□□□□□ -0.1
CIITA-210ENST00000575513 ZNF518BQ9C0D4 1074 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 SMOC2Q9H3U7 446 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 SLITRK6Q9H5Y7 841 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 COMMD8Q9NX08 183 aa14.43□□□□□ -0.1
CIITA-210ENST00000575513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.43□□□□□ -0.1
CIITA-210ENST00000575513 F8VP50 259 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 NARSO43776 548 aaKnown RBP14.42□□□□□ -0.1
CIITA-210ENST00000575513 AFPP02771 609 aaKnown RBP14.42□□□□□ -0.1
CIITA-210ENST00000575513 PSMC3P17980 439 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 YWHAEP62258 255 aaKnown RBP14.42□□□□□ -0.1
CIITA-210ENST00000575513 CUL2Q13617 745 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 KLHL40Q2TBA0 621 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 DPCR1Q3MIW9 517 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 GPR158Q5T848 1215 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 SDHAF4Q5VUM1 108 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 SMYD5Q6GMV2 418 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 MON1AQ86VX9 555 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 ARID3BQ8IVW6 561 aaPredicted RBP14.42□□□□□ -0.1
CIITA-210ENST00000575513 CMTM8Q8IZV2 173 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 FBXL6Q8N531 539 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 MRPS31Q92665 395 aaKnown RBP14.42□□□□□ -0.1
CIITA-210ENST00000575513 TATDN2Q93075 761 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 KXD1Q9BQD3 176 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 SLC46A2Q9BY10 475 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 THAP9Q9H5L6 903 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 CSNK1G1Q9HCP0 422 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 DMAP1Q9NPF5 467 aaPredicted RBP14.42□□□□□ -0.1
CIITA-210ENST00000575513 TRPV5Q9NQA5 729 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 CISHQ9NSE2 258 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 IL37Q9NZH6 218 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 FBXL21Q9UKT6 434 aa14.42□□□□□ -0.1
CIITA-210ENST00000575513 MAGED2Q9UNF1 606 aaPredicted RBP14.42□□□□□ -0.1
CIITA-210ENST00000575513 CLDN5O00501 218 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 RTN3O95197 1032 aaPredicted RBP14.41□□□□□ -0.1
CIITA-210ENST00000575513 PDE6CP51160 858 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 NUBP1P53384 320 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 GPC5P78333 572 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 TPD52L1Q16890 204 aaPredicted RBP14.41□□□□□ -0.1
CIITA-210ENST00000575513 FAM35AQ86V20 835 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 IRF2BP1Q8IU81 584 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 FAM114A1Q8IWE2 563 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 NUP93Q8N1F7 819 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 C12orf29Q8N999 325 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 EHBP1Q8NDI1 1231 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 LMO3Q8TAP4 145 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 SLC2A14Q8TDB8 520 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 OVCA2Q8WZ82 227 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 DNASE1L2Q92874 299 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 CYFIP2Q96F07 1278 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 TMEM176AQ96HP8 235 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 SHDQ96IW2 340 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 TWNKQ96RR1 684 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 MED10Q9BTT4 135 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 TRMT61BQ9BVS5 477 aaKnown RBP14.41□□□□□ -0.1
CIITA-210ENST00000575513 PLA2G2FQ9BZM2 168 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 KCNH6Q9H252 994 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.41□□□□□ -0.1
CIITA-210ENST00000575513 TMEM63CQ9P1W3 806 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 HMGXB4Q9UGU5 601 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 KIAA1257Q9ULG3 409 aa14.41□□□□□ -0.1
CIITA-210ENST00000575513 ARIH1Q9Y4X5 557 aaPredicted RBP14.41□□□□□ -0.1
CIITA-210ENST00000575513 FAM92AA1XBS5 289 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 HEPACAM2A8MVW5 462 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 CD58P19256 250 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 AVPR1AP37288 418 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 VIPR2P41587 438 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 CLCN5P51795 746 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 CACNA2D1P54289 1103 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 MLLT6P55198 1093 aaPredicted RBP14.4□□□□□ -0.1
CIITA-210ENST00000575513 CYP4F8P98187 520 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms