RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ABI2Q9NYB9 513 aaPredicted RBP11.32□□□□□ -0.6
LITAF-216ENST00000574848 SIT1Q9Y3P8 196 aa11.32□□□□□ -0.6
LITAF-216ENST00000574848 USP34Q70CQ2 3546 aa11.32□□□□□ -0.6
LITAF-216ENST00000574848 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 CLIC2O15247 247 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 GLULP15104 373 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 HMGA1P17096 107 aaKnown RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 RFX1P22670 979 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 WARSP23381 471 aaKnown RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 GABRR2P28476 465 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 MLLT6P55198 1093 aaPredicted RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 STX17P56962 302 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 LRRC63Q05C16 580 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 TRIM14Q14142 442 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 GRM2Q14416 872 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 STXBP5Q5T5C0 1151 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 TMEM150AQ86TG1 271 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 GUF1Q8N442 669 aaKnown RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 KIAA1524Q8TCG1 905 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 IRF7Q92985 503 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 CLDN23Q96B33 292 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 RSPRY1Q96DX4 576 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 TRMT2BQ96GJ1 504 aaKnown RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 MSANTD3Q96H12 275 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 CEP295NLQ96MC4 621 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 ZNF830Q96NB3 372 aaPredicted RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 FNBP1Q96RU3 617 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 VRTNQ9H8Y1 702 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 LIMA1Q9UHB6 759 aaKnown RBP11.31□□□□□ -0.6
LITAF-216ENST00000574848 MYO15AQ9UKN7 3530 aa11.31□□□□□ -0.6
LITAF-216ENST00000574848 VPS13AQ96RL7 3174 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 HEPACAM2A8MVW5 462 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 PDXKO00764 312 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 CHADO15335 359 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 TACC1O75410 805 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 NOL4O94818 638 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 DCNP07585 359 aaKnown RBP11.3□□□□□ -0.6
LITAF-216ENST00000574848 CSH1P0DML2 217 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 CSH2P0DML3 217 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 DLATP10515 647 aaKnown RBP11.3□□□□□ -0.6
LITAF-216ENST00000574848 ACAT1P24752 427 aaKnown RBP11.3□□□□□ -0.6
LITAF-216ENST00000574848 DDX6P26196 483 aaKnown RBP eCLIP11.3□□□□□ -0.6
LITAF-216ENST00000574848 TARSP26639 723 aaKnown RBP11.3□□□□□ -0.6
LITAF-216ENST00000574848 ATICP31939 592 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 VIPR2P41587 438 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 MAGEA11P43364 429 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 RPS9P46781 194 aaKnown RBP11.3□□□□□ -0.6
LITAF-216ENST00000574848 AP3M2P53677 418 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 RPL10AP62906 217 aaKnown RBP11.3□□□□□ -0.6
LITAF-216ENST00000574848 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 NFIL3Q16649 462 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 ARHGAP15Q53QZ3 475 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 TCP11X2Q5H9J9 407 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 ARID3BQ8IVW6 561 aaPredicted RBP11.3□□□□□ -0.6
LITAF-216ENST00000574848 PLEKHO2Q8TD55 490 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 ZNF516Q92618 1163 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 MYRFLQ96LU7 910 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 GCNAQ96QF7 691 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 NELL2Q99435 816 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 SYT15Q9BQS2 421 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 XYLT2Q9H1B5 865 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 ATXN3LQ9H3M9 355 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 SLITRK6Q9H5Y7 841 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 TASP1Q9H6P5 420 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 BRD9Q9H8M2 597 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 HEBP1Q9NRV9 189 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 CDH9Q9ULB4 789 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 TRAF3IP3Q9Y228 551 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.3□□□□□ -0.6
LITAF-216ENST00000574848 ITIH6Q6UXX5 1313 aa11.3□□□□□ -0.6
LITAF-216ENST00000574848 LRRC10BA6NIK2 292 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 STK25O00506 426 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 MAN2B1O00754 1011 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 MAPK13O15264 365 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 HCRTO43612 131 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 EXOC3O60645 756 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 TADA3O75528 432 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 PRAMEF12O95522 483 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
LITAF-216ENST00000574848 F11P03951 625 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 SKILP12757 684 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 TNNI1P19237 187 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 GDI1P31150 447 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 CYP4F8P98187 520 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 FZD5Q13467 585 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 NR1I3Q14994 352 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 MAPRE1Q15691 268 aaKnown RBP11.29□□□□□ -0.6
LITAF-216ENST00000574848 CCDC142Q17RM4 750 aa11.29□□□□□ -0.6
LITAF-216ENST00000574848 DNTTIP2Q5QJE6 756 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms