RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 ZNF667Q5HYK9 610 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 MDH1BQ5I0G3 518 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 SMYD4Q8IYR2 804 aaPredicted RBP21.01■□□□□ 0.95
SCARF1-208ENST00000574545 CELF5Q8N6W0 485 aaKnown RBP21.01■□□□□ 0.95
SCARF1-208ENST00000574545 MAB21L3Q8N8X9 362 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 BPIFB1Q8TDL5 484 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 CCDC34Q96HJ3 373 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 TIGD1Q96MW7 591 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 SMG9Q9H0W8 520 aaKnown RBP21.01■□□□□ 0.95
SCARF1-208ENST00000574545 SMYD3Q9H7B4 428 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 TMEM30AQ9NV96 361 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 CCL26Q9Y258 94 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 PIAS3Q9Y6X2 628 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 RIF1Q5UIP0 2472 aaKnown RBP21■□□□□ 0.95
SCARF1-208ENST00000574545 DPYSL4O14531 572 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 ASS1P00966 412 aaKnown RBP21■□□□□ 0.95
SCARF1-208ENST00000574545 MAGEA9P43362 315 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 RPS9P46781 194 aaKnown RBP21■□□□□ 0.95
SCARF1-208ENST00000574545 VAMP7P51809 220 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 CACNA2D1P54289 1103 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 CYP27A1Q02318 531 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 SGSM1Q2NKQ1 1148 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 ARHGAP29Q52LW3 1261 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 YAF2Q8IY57 180 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 RIN3Q8TB24 985 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 MRPS31Q92665 395 aaKnown RBP21■□□□□ 0.95
SCARF1-208ENST00000574545 TAF4BQ92750 862 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 USP13Q92995 863 aaPredicted RBP21■□□□□ 0.95
SCARF1-208ENST00000574545 C8orf48Q96LL4 319 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 BCO2Q9BYV7 579 aa21■□□□□ 0.95
SCARF1-208ENST00000574545 MRPS17Q9Y2R5 130 aaKnown RBP21■□□□□ 0.95
SCARF1-208ENST00000574545 GOLGA6L4A6NEF3 574 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 RPL13P26373 211 aaKnown RBP20.99■□□□□ 0.95
SCARF1-208ENST00000574545 PSMC2P35998 433 aaKnown RBP20.99■□□□□ 0.95
SCARF1-208ENST00000574545 GRIK1P39086 918 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 PRCPP42785 496 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 RAP1GAPP47736 663 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 USP46P62068 366 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 PPP3CAQ08209 521 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 EDRF1Q3B7T1 1238 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 PAQR9Q6ZVX9 377 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 INTS8Q75QN2 995 aaKnown RBP20.99■□□□□ 0.95
SCARF1-208ENST00000574545 B3GALNT2Q8NCR0 500 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 ZFYVE19Q96K21 471 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 GSDMAQ96QA5 445 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 FAM83CQ9BQN1 747 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 TTLL2Q9BWV7 592 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 B3GNT5Q9BYG0 378 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 TDP1Q9NUW8 608 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 GCNT4Q9P109 453 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 PCDHA5Q9Y5H7 936 aa20.99■□□□□ 0.95
SCARF1-208ENST00000574545 KIF26AQ9ULI4 1882 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-208ENST00000574545 ANAPC1Q9H1A4 1944 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 NCAM2O15394 837 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 HLA-DRAP01903 254 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 AVPR1AP37288 418 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 ZNF268Q14587 947 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-208ENST00000574545 ZNF658Q5TYW1 1059 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-208ENST00000574545 DENND5BQ6ZUT9 1274 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 FRMD5Q7Z6J6 570 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 ELOA2Q8IYF1 753 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-208ENST00000574545 FAM186BQ8IYM0 893 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 CSGALNACT1Q8TDX6 532 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 FAM3CQ92520 227 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 ERCC4Q92889 916 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-208ENST00000574545 SLC22A12Q96S37 553 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 ZNF518BQ9C0D4 1074 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 C8orf33Q9H7E9 229 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-208ENST00000574545 RMND1Q9NWS8 449 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 GTSE1Q9NYZ3 720 aa20.98■□□□□ 0.95
SCARF1-208ENST00000574545 PTPRZ1P23471 2315 aaPredicted RBP20.97■□□□□ 0.95
SCARF1-208ENST00000574545 F8VP50 259 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 CLDN5O00501 218 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 TRIM66O15016 1216 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 SP9P0CG40 484 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 TRIM49P0CI25 452 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 TRIM49CP0CI26 452 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 ASPAP45381 313 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 SOX9P48436 509 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 GCLMP48507 274 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 NOP14P78316 857 aaKnown RBP20.97■□□□□ 0.95
SCARF1-208ENST00000574545 PLCB2Q00722 1185 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 WDR44Q5JSH3 913 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 SPOPLQ6IQ16 392 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 ZC3H3Q8IXZ2 948 aaKnown RBP20.97■□□□□ 0.95
SCARF1-208ENST00000574545 MSANTD3Q96H12 275 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 CYP2S1Q96SQ9 504 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 KIF9Q9HAQ2 790 aa20.97■□□□□ 0.95
SCARF1-208ENST00000574545 CHRNB1P11230 501 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 CCNE1P24864 410 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 TNK2Q07912 1038 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 TXNDC11Q6PKC3 985 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 SCARA5Q6ZMJ2 495 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 MAMSTRQ6ZN01 415 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 ASCL5Q7RTU5 278 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 CRYBG2Q8N1P7 616 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 TAS1R2Q8TE23 839 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 ELOVL4Q9GZR5 314 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 APOBEC3GQ9HC16 384 aaKnown RBP20.96■□□□□ 0.95
SCARF1-208ENST00000574545 HPS4Q9NQG7 708 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms