RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 SPAARA0A1B0GVQ0 90 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 HCRTO43612 131 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 NFATC1O95644 943 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 HNRNPLP14866 589 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCDC40-211ENST00000574099 POLR2BP30876 1174 aaKnown RBP18.83■□□□□ 0.6
CCDC40-211ENST00000574099 CRY1Q16526 586 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 INTS6LQ5JSJ4 861 aaKnown RBP18.83■□□□□ 0.6
CCDC40-211ENST00000574099 TMEM92Q6UXU6 159 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 SFTPA1Q8IWL2 248 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 TMEFF1Q8IYR6 380 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 FRMD1Q8N878 549 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 FIZ1Q96SL8 496 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 NUSAP1Q9BXS6 441 aaKnown RBP18.83■□□□□ 0.6
CCDC40-211ENST00000574099 GCNT4Q9P109 453 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 GTF3C4Q9UKN8 822 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 KLK13Q9UKR3 277 aa18.83■□□□□ 0.6
CCDC40-211ENST00000574099 PKD1L2Q7Z442 2459 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 TBCAO75347 108 aaKnown RBP18.82■□□□□ 0.6
CCDC40-211ENST00000574099 WNT7BP56706 349 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 TFAMQ00059 246 aaKnown RBP18.82■□□□□ 0.6
CCDC40-211ENST00000574099 GTF2BQ00403 316 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 LMAN2Q12907 356 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 MCM6Q14566 821 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 CRELD2Q6UXH1 353 aaPredicted RBP18.82■□□□□ 0.6
CCDC40-211ENST00000574099 CCDC26Q8TAB7 109 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 FAM84AQ96KN4 292 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 MYRFLQ96LU7 910 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 SLC32A1Q9H598 525 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 ABCB6Q9NP58 842 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 FSCN3Q9NQT6 498 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 EVLQ9UI08 416 aaPredicted RBP18.82■□□□□ 0.6
CCDC40-211ENST00000574099 NEUROG3Q9Y4Z2 214 aa18.82■□□□□ 0.6
CCDC40-211ENST00000574099 SCAMP3O14828 347 aaKnown RBP18.81■□□□□ 0.6
CCDC40-211ENST00000574099 MAP3K13O43283 966 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 ITGB3P05106 788 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 ENGP17813 658 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 HDCP19113 662 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 SCP2P22307 547 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 PNPLA4P41247 253 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 PTGER3P43115 390 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 MYL7Q01449 175 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 GAB4Q2WGN9 574 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 RILPL1Q5EBL4 403 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 SCARA3Q6AZY7 606 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 SLFN12LQ6IEE8 588 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 LRSAM1Q6UWE0 723 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 LPCAT2Q7L5N7 544 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 OSTM1Q86WC4 334 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 SPATA2LQ8IUW3 424 aaPredicted RBP18.81■□□□□ 0.6
CCDC40-211ENST00000574099 ALLCQ8N6M5 410 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 FSIP1Q8NA03 581 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 POMGNT1Q8WZA1 660 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 CALML4Q96GE6 196 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 SPACA7Q96KW9 195 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 FNBP1Q96RU3 617 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 PKMYT1Q99640 499 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 ACBD6Q9BR61 282 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 ZDHHC4Q9NPG8 344 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 BLOC1S4Q9NUP1 217 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 TMEM74BQ9NUR3 256 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 BCCIPQ9P287 314 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCDC40-211ENST00000574099 AGAP1Q9UPQ3 857 aa18.81■□□□□ 0.6
CCDC40-211ENST00000574099 HUS1O60921 280 aa18.8■□□□□ 0.6
CCDC40-211ENST00000574099 ALDH1A2O94788 518 aa18.8■□□□□ 0.6
CCDC40-211ENST00000574099 KLF8O95600 359 aaPredicted RBP18.8■□□□□ 0.6
CCDC40-211ENST00000574099 TIE1P35590 1138 aa18.8■□□□□ 0.6
CCDC40-211ENST00000574099 P2RY2P41231 377 aa18.8■□□□□ 0.6
CCDC40-211ENST00000574099 SIM1P81133 766 aaPredicted RBP18.8■□□□□ 0.6
CCDC40-211ENST00000574099 ZXDBP98169 803 aa18.8■□□□□ 0.6
CCDC40-211ENST00000574099 TXNDC5Q8NBS9 432 aaKnown RBP18.8■□□□□ 0.6
CCDC40-211ENST00000574099 RASSF8Q8NHQ8 419 aa18.8■□□□□ 0.6
CCDC40-211ENST00000574099 OLIG1Q8TAK6 271 aa18.8■□□□□ 0.6
CCDC40-211ENST00000574099 ZSCAN31Q96LW9 406 aaPredicted RBP18.8■□□□□ 0.6
CCDC40-211ENST00000574099 ARHGAP26Q9UNA1 814 aa18.8■□□□□ 0.6
CCDC40-211ENST00000574099 SGK1O00141 431 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 LEFTY2O00292 366 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 IL18RAPO95256 599 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 SEC24BO95487 1268 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 CYP17A1P05093 508 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 CFIP05156 583 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 PLCG1P19174 1290 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 MESP2Q0VG99 397 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 FILIP1Q7Z7B0 1213 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 ADGRF2Q8IZF7 708 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 C1orf127Q8N9H9 656 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 ZSWIM2Q8NEG5 633 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 WHAMMQ8TF30 809 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 HMGB4Q8WW32 186 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 RAD54LQ92698 747 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 FAM213AQ9BRX8 229 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 GTPBP2Q9BX10 602 aaKnown RBP18.79■□□□□ 0.6
CCDC40-211ENST00000574099 MBD1Q9UIS9 605 aaPredicted RBP18.79■□□□□ 0.6
CCDC40-211ENST00000574099 MSRB2Q9Y3D2 182 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 SNX9Q9Y5X1 595 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 STYXL1Q9Y6J8 313 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 DMXL2Q8TDJ6 3036 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 PI4KAP42356 2102 aa18.79■□□□□ 0.6
CCDC40-211ENST00000574099 CEP192Q8TEP8 1941 aa18.78■□□□□ 0.6
CCDC40-211ENST00000574099 PLXND1Q9Y4D7 1925 aa18.78■□□□□ 0.6
CCDC40-211ENST00000574099 TNFRSF10BO14763 440 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms