RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 GTSE1Q9NYZ3 720 aa27.81■■■□□ 2.04
NPLOC4-215ENST00000574095 CCL26Q9Y258 94 aa27.81■■■□□ 2.04
NPLOC4-215ENST00000574095 FRMD4BQ9Y2L6 1034 aa27.81■■■□□ 2.04
NPLOC4-215ENST00000574095 R4GN57 208 aa27.81■■■□□ 2.04
NPLOC4-215ENST00000574095 KIF26AQ9ULI4 1882 aaPredicted RBP27.81■■■□□ 2.04
NPLOC4-215ENST00000574095 F5P12259 2224 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 PRR23AA6NEV1 266 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 A8MXQ7 604 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 LAMTOR5O43504 91 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 PTPN1P18031 435 aaKnown RBP27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 RPS9P46781 194 aaKnown RBP27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 KCNB1Q14721 858 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 ZNF699Q32M78 642 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 VSTM1Q6UX27 236 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 MON1AQ86VX9 555 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 USP13Q92995 863 aaPredicted RBP27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 SMYD3Q9H7B4 428 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 VRTNQ9H8Y1 702 aa27.8■■■□□ 2.04
NPLOC4-215ENST00000574095 RAP1GAPP47736 663 aa27.79■■■□□ 2.04
NPLOC4-215ENST00000574095 ZNF667Q5HYK9 610 aa27.79■■■□□ 2.04
NPLOC4-215ENST00000574095 TMC2Q8TDI7 906 aa27.79■■■□□ 2.04
NPLOC4-215ENST00000574095 LMAN1LQ9HAT1 526 aa27.79■■■□□ 2.04
NPLOC4-215ENST00000574095 TRPC7Q9HCX4 862 aa27.79■■■□□ 2.04
NPLOC4-215ENST00000574095 ANAPC1Q9H1A4 1944 aa27.79■■■□□ 2.04
NPLOC4-215ENST00000574095 NR2F2P24468 414 aa27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 MLLT6P55198 1093 aaPredicted RBP27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 TNK2Q07912 1038 aa27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 C1orf220Q5T0J3 134 aa27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 SCARA5Q6ZMJ2 495 aa27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 FMR1NBQ8N0W7 255 aaPredicted RBP27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 GUF1Q8N442 669 aaKnown RBP27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 SPATA17Q96L03 361 aa27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 C8orf33Q9H7E9 229 aaPredicted RBP27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 GKN1Q9NS71 199 aa27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 TDP1Q9NUW8 608 aa27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 THG1LQ9NWX6 298 aaKnown RBP27.78■■■□□ 2.04
NPLOC4-215ENST00000574095 GOLGA6L4A6NEF3 574 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 SOBPA7XYQ1 873 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 ANXA13P27216 316 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 PNOCQ13519 176 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 NFIL3Q16649 462 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 ZACNQ401N2 412 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 SV2AQ7L0J3 742 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 SLC22A12Q96S37 553 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 CYP2S1Q96SQ9 504 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 SDCBP2Q9H190 292 aa27.77■■■□□ 2.04
NPLOC4-215ENST00000574095 SPECC1L-ADORA2AF8WAN1 911 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 AKAP3O75969 853 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 VAMP7P51809 220 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 CACNA2D1P54289 1103 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 USP46P62068 366 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 PLCB2Q00722 1185 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 CSTF1Q05048 431 aaKnown RBP27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 MTAPQ13126 283 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 SGSM1Q2NKQ1 1148 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 DENND5BQ6ZUT9 1274 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 SMYD4Q8IYR2 804 aaPredicted RBP27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 B3GALNT2Q8NCR0 500 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 MSANTD3Q96H12 275 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 CCDC34Q96HJ3 373 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 B3GNT5Q9BYG0 378 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 ZNF518BQ9C0D4 1074 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 FBXO4Q9UKT5 387 aa27.76■■■□□ 2.03
NPLOC4-215ENST00000574095 F8VP50 259 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 CLDN5O00501 218 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 IKBKBO14920 756 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 TRIM66O15016 1216 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 CTHP32929 405 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 TXNDC11Q6PKC3 985 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 RIN3Q8TB24 985 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 KIF9Q9HAQ2 790 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 FANCMQ8IYD8 2048 aa27.75■■■□□ 2.03
NPLOC4-215ENST00000574095 C2orf78A6NCI8 922 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 MAPK13O15264 365 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 CHRNB1P11230 501 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 ADAM9Q13443 819 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 TRIM68Q6AZZ1 485 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 SPOPLQ6IQ16 392 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 TSSK4Q6SA08 328 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 RALGPS2Q86X27 583 aaPredicted RBP27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 ARL14EPQ8N8R7 260 aaPredicted RBP27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 TTC16Q8NEE8 873 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 C8orf48Q96LL4 319 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 CEP295NLQ96MC4 621 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 FAM83CQ9BQN1 747 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 CHRDQ9H2X0 955 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 TMEM30AQ9NV96 361 aa27.74■■■□□ 2.03
NPLOC4-215ENST00000574095 TRAV19A0A0A6YYK7 116 aa27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 HLA-DRAP01903 254 aa27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 CKMP06732 381 aa27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 USP17L7P0C7H9 530 aa27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 TRIM49P0CI25 452 aa27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 TRIM49CP0CI26 452 aa27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 RPL13P26373 211 aaKnown RBP27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 ZNF268Q14587 947 aaPredicted RBP27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 ITPRIPL2Q3MIP1 535 aa27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 C1orf228Q6PIY5 440 aa27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 ZC3H14Q6PJT7 736 aaKnown RBP27.73■■■□□ 2.03
NPLOC4-215ENST00000574095 FAM186BQ8IYM0 893 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms