RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 NPAS4Q8IUM7 802 aa10.61□□□□□ -0.71
SMG6-213ENST00000573166 SEMA4DQ92854 862 aa10.61□□□□□ -0.71
SMG6-213ENST00000573166 WDR24Q96S15 920 aa10.61□□□□□ -0.71
SMG6-213ENST00000573166 TSPAN18Q96SJ8 248 aa10.61□□□□□ -0.71
SMG6-213ENST00000573166 FNDC3AQ9Y2H6 1198 aaKnown RBP10.61□□□□□ -0.71
SMG6-213ENST00000573166 CAND2O75155 1236 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 ATP1A1P05023 1023 aaKnown RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 SERPINB6P35237 376 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 DR1Q01658 176 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 EFEMP1Q12805 493 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 CLEC16AQ2KHT3 1053 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 ACCSLQ4AC99 568 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 SREK1Q8WXA9 508 aaKnown RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 SHC3Q92529 594 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 BHMTQ93088 406 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 KCNK9Q9NPC2 374 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 DMAC2Q9NW81 257 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 TMEM161AQ9NX61 479 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 IGKV6D-21A0A0A0MT36 114 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 LAG3P18627 525 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 ITIH5Q86UX2 942 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 ECHDC2Q86YB7 292 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 B3GALNT2Q8NCR0 500 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 UHMK1Q8TAS1 419 aaKnown RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 GANCQ8TET4 914 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 GIPC2Q8TF65 315 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 LRRC15Q8TF66 581 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 PPM1EQ8WY54 764 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 BTBD6Q96KE9 485 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 FBXO44Q9H4M3 255 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 WDCPQ9H6R7 721 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 MBL2P11226 248 aaPredicted RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 EZRP15311 586 aaKnown RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 PAX3P23760 479 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 CLCNKBP51801 687 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 YWHAGP61981 247 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMG6-213ENST00000573166 PSMD5Q16401 504 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 HEATR6Q6AI08 1181 aaKnown RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 SCUBE3Q8IX30 993 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 TMEM192Q8IY95 271 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 EDEM1Q92611 657 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 SELENOSQ9BQE4 189 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 RNF39Q9H2S5 420 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 SP110Q9HB58 689 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 ANAPC5Q9UJX4 755 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 DUSP10Q9Y6W6 482 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 ZFXP17010 805 aaPredicted RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 AVPR1AP37288 418 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 AP1B1Q10567 949 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 DNAJC21Q5F1R6 531 aaKnown RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 DENND2CQ68D51 928 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 EPS8L1Q8TE68 723 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 PDCD6IPQ8WUM4 868 aaKnown RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 SNX27Q96L92 541 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 TTPALQ9BTX7 342 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
SMG6-213ENST00000573166 LACRTQ9GZZ8 138 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 CDH9Q9ULB4 789 aa10.6□□□□□ -0.71
SMG6-213ENST00000573166 A0A0U1RQF3 1178 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 DFFAO00273 331 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 CAPN2P17655 700 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 YWHAQP27348 245 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 OR1D2P34982 312 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 CNGA2Q16280 664 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 BOLA3Q53S33 107 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 FAM131BQ86XD5 332 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 RXFP2Q8WXD0 754 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 SLC12A8A0AV02 714 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 DDX3XO00571 662 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMG6-213ENST00000573166 F9P00740 461 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 C4BPAP04003 597 aaKnown RBP10.59□□□□□ -0.71
SMG6-213ENST00000573166 SLC2A3P11169 496 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
SMG6-213ENST00000573166 MOGSQ13724 837 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 ZRSR2Q15696 482 aaKnown RBP10.59□□□□□ -0.71
SMG6-213ENST00000573166 PPM1LQ5SGD2 360 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 RCOR2Q8IZ40 523 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 CCHCR1Q8TD31 782 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 KAT2BQ92831 832 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMG6-213ENST00000573166 DDX47Q9H0S4 455 aaKnown RBP10.59□□□□□ -0.71
SMG6-213ENST00000573166 GANQ9H2C0 597 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 EEF2KO00418 725 aaKnown RBP10.59□□□□□ -0.71
SMG6-213ENST00000573166 APOL1O14791 398 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 CXCL14O95715 111 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 PIGRP01833 764 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 EPHB2P29323 1055 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 SLC12A2P55011 1212 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 SLC7A5Q01650 507 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 LGSNQ5TDP6 509 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 PSRC1Q6PGN9 363 aaPredicted RBP10.59□□□□□ -0.71
SMG6-213ENST00000573166 FAM71AQ8IYT1 594 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 MCOLN2Q8IZK6 566 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 TNS4Q8IZW8 715 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 C12orf29Q8N999 325 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 GSDMBQ8TAX9 411 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 C1orf54Q8WWF1 131 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 OSGEPQ9NPF4 335 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 FAM114A2Q9NRY5 505 aa10.59□□□□□ -0.71
SMG6-213ENST00000573166 RSPH14Q9UHP6 348 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms