RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TTLL2Q9BWV7 592 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 GTSE1Q9NYZ3 720 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 R4GN57 208 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 CCNE1P24864 410 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 DDX6P26196 483 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMG6-212ENST00000573153 CTHP32929 405 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 MAGEA9P43362 315 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 RAP1GAPP47736 663 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 CDH8P55286 799 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 ENPEPQ07075 957 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 NCOA4Q13772 614 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 ZNF268Q14587 947 aaPredicted RBP18.48■□□□□ 0.55
SMG6-212ENST00000573153 ARHGAP29Q52LW3 1261 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 MDH1BQ5I0G3 518 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 VSTM1Q6UX27 236 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 SV2AQ7L0J3 742 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 SPATA20Q8TB22 786 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 MMS19Q96T76 1030 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 NELL2Q99435 816 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 B3GNT5Q9BYG0 378 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 BCO2Q9BYV7 579 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 ZNF518BQ9C0D4 1074 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 HMGXB4Q9UGU5 601 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 MAGED2Q9UNF1 606 aaPredicted RBP18.48■□□□□ 0.55
SMG6-212ENST00000573153 MAPK8IP1Q9UQF2 711 aa18.48■□□□□ 0.55
SMG6-212ENST00000573153 HELZP42694 1942 aaKnown RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 MAN2B1O00754 1011 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 CALUO43852 315 aaPredicted RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 PTPN1P18031 435 aaKnown RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 GNL1P36915 607 aaPredicted RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 PPP3CAQ08209 521 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 USP4Q13107 963 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 MTAPQ13126 283 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 ZNF77Q15935 545 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 COBLL1Q53SF7 1204 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 MAMSTRQ6ZN01 415 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 C4orf50Q6ZRC1 276 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 SCN4BQ8IWT1 228 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 SMYD4Q8IYR2 804 aaPredicted RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 CELF5Q8N6W0 485 aaKnown RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 FAM3CQ92520 227 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 SYAP1Q96A49 352 aaPredicted RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 MAGEC2Q9UBF1 373 aaPredicted RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 ZMYM5Q9UJ78 669 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 FBXO4Q9UKT5 387 aa18.47■□□□□ 0.55
SMG6-212ENST00000573153 NDRG2Q9UN36 371 aaKnown RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 ZNF638Q14966 1978 aaKnown RBP18.47■□□□□ 0.55
SMG6-212ENST00000573153 C2orf78A6NCI8 922 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 F8VP50 259 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 SPECC1L-ADORA2AF8WAN1 911 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 CLDN5O00501 218 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 OLFM2O95897 454 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 ASS1P00966 412 aaKnown RBP18.46■□□□□ 0.55
SMG6-212ENST00000573153 ASPAP45381 313 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 FAM160A1Q05DH4 1040 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 PNOCQ13519 176 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 ZNF699Q32M78 642 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 ZNF528Q3MIS6 628 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 SPOPLQ6IQ16 392 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 ZC3H3Q8IXZ2 948 aaKnown RBP18.46■□□□□ 0.55
SMG6-212ENST00000573153 ELOA2Q8IYF1 753 aaPredicted RBP18.46■□□□□ 0.55
SMG6-212ENST00000573153 OR6B3Q8NGW1 331 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 C8orf48Q96LL4 319 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 CEP295NLQ96MC4 621 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 TIGD1Q96MW7 591 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 CYP2S1Q96SQ9 504 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 APOBEC3GQ9HC16 384 aaKnown RBP18.46■□□□□ 0.55
SMG6-212ENST00000573153 TDP1Q9NUW8 608 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 SPATA6Q9NWH7 488 aaPredicted RBP18.46■□□□□ 0.55
SMG6-212ENST00000573153 C2orf42Q9NWW7 574 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 NXF1Q9UBU9 619 aaKnown RBP18.46■□□□□ 0.55
SMG6-212ENST00000573153 CIZ1Q9ULV3 898 aaPredicted RBP18.46■□□□□ 0.55
SMG6-212ENST00000573153 GVINP1Q7Z2Y8 2422 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 GPR179Q6PRD1 2367 aa18.46■□□□□ 0.55
SMG6-212ENST00000573153 GOLGA6L4A6NEF3 574 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 IKBKBO14920 756 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 LILRB5O75023 590 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 TRIM49P0CI25 452 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 TRIM49CP0CI26 452 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 TCF3P15923 654 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 NR2F2P24468 414 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 HOXC13P31276 330 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 TNNC1P63316 161 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 NOP14P78316 857 aaKnown RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 TRPC3Q13507 836 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 MAPRE1Q15691 268 aaKnown RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 TRIM68Q6AZZ1 485 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 ZBTB44Q8NCP5 570 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 B3GALNT2Q8NCR0 500 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 ZMIZ2Q8NF64 920 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 TTC8Q8TAM2 541 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 MRPS31Q92665 395 aaKnown RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 NKD2Q969F2 451 aaPredicted RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 MSANTD3Q96H12 275 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 GSDMAQ96QA5 445 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 GCNAQ96QF7 691 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 C8orf33Q9H7E9 229 aaPredicted RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 RBM12Q9NTZ6 932 aaKnown RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 UXTQ9UBK9 157 aaPredicted RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 FRMD4BQ9Y2L6 1034 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms