RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 NRIP3Q9NQ35 241 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 A1CFQ9NQ94 594 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 DDX18Q9NVP1 670 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CWC15Q9P013 229 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CPSF3Q9UKF6 684 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 NAALADL1Q9UQQ1 740 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 B3GALT1Q9Y5Z6 326 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 COL15A1P39059 1388 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 NSD2O96028 1365 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 A0A1W2PQ09 198 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 PRSS38A1L453 326 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 KRBA1A5PL33 1030 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 TRIM43BA6NCK2 446 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ZBTB42B2RXF5 422 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 KIF2AO00139 706 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 DAB1O75553 588 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ZIC2O95409 532 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 STAMBPO95630 424 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 CST3P01034 146 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 TUBB4AP04350 444 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 MYBL1P10243 752 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 GAAP10253 952 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 XRCC6P12956 609 aaKnown RBP eCLIP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 KRT4P19013 534 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 SAT1P21673 171 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 MAOBP27338 520 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 SOX6P35712 828 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 PIP4K2AP48426 406 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ETV1P50549 477 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 LUMP51884 338 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 KCNJ10P78508 379 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ARF5P84085 180 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 CDK17Q00537 523 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 BEX3Q00994 111 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 SCAPQ12770 1279 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 KIF5AQ12840 1032 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 CUL2Q13617 745 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 MXD4Q14582 209 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 SSPNQ14714 243 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 TBCCQ15814 346 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 TRIM71Q2Q1W2 868 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 XKR9Q5GH70 373 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 PPM1JQ5JR12 505 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 EFHC2Q5JST6 749 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 NUTM2GQ5VZR2 741 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 OLFML2BQ68BL8 750 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ADALQ6DHV7 355 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 FIGNL1Q6PIW4 674 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 TRAT1Q6PIZ9 186 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ARHGAP36Q6ZRI8 547 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 VPS52Q8N1B4 723 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 MRPL43Q8N983 215 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 FBXO15Q8NCQ5 510 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 CNNM3Q8NE01 707 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 GPR150Q8NGU9 434 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 SUN5Q8TC36 379 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 METTL6Q8TCB7 284 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 WHAMMQ8TF30 809 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 RNF139Q8WU17 664 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 BCL7CQ8WUZ0 217 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 C17orf50Q8WW18 174 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 RSC1A1Q92681 617 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 DLG3Q92796 817 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 CASP10Q92851 521 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 TRIM43Q96BQ3 446 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 MRGPRX1Q96LB2 322 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 C16orf92Q96LL3 132 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 CEP295NLQ96MC4 621 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 KREMEN1Q96MU8 473 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 LENG8Q96PV6 779 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 DPH2Q9BQC3 489 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 FUZQ9BT04 418 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ACPTQ9BZG2 426 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 USP44Q9H0E7 712 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 BRD8Q9H0E9 1235 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 STMN4Q9H169 189 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 HSD3B7Q9H2F3 369 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 RUBCNLQ9H714 662 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 MRPL44Q9H9J2 332 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 CHODLQ9H9P2 273 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ATP13A1Q9HD20 1204 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 POLMQ9NP87 494 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 CD93Q9NPY3 652 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ARHGEF3Q9NR81 526 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 TMEM51Q9NW97 253 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 NMRK1Q9NWW6 199 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 DDX43Q9NXZ2 648 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 NINJ2Q9NZG7 142 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 TSPYL4Q9UJ04 414 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ADAMTS8Q9UP79 889 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 PAXBP1Q9Y5B6 917 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 PCDHB1Q9Y5F3 818 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 SLC30A1Q9Y6M5 507 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 NUMBLQ9Y6R0 609 aa5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-210ENST00000572787 ATP8B3O60423 1300 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 A8MV72 311 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 L7N2F9 121 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 O00370 1275 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms