RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TMEM8BA6NDV4 472 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 SRRM3A6NNA2 597 aaPredicted RBP21.32■■□□□ 1
CCDC40-206ENST00000572083 HCRTO43612 131 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 ITGB3P05106 788 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 PLCG1P19174 1290 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 OPRD1P41143 372 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 WNT7BP56706 349 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 TFAMQ00059 246 aaKnown RBP21.32■■□□□ 1
CCDC40-206ENST00000572083 KCNB1Q14721 858 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 ARL6IP4Q66PJ3 421 aaKnown RBP21.32■■□□□ 1
CCDC40-206ENST00000572083 SLFN12LQ6IEE8 588 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 ARMCX6Q7L4S7 300 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 SCN4BQ8IWT1 228 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 ZCCHC14Q8WYQ9 949 aaKnown RBP21.32■■□□□ 1
CCDC40-206ENST00000572083 POMGNT1Q8WZA1 660 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 FAM84AQ96KN4 292 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 PKMYT1Q99640 499 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 ACBD6Q9BR61 282 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 GCNT4Q9P109 453 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 MMP17Q9ULZ9 603 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 AGAP1Q9UPQ3 857 aa21.32■■□□□ 1
CCDC40-206ENST00000572083 DSPP15924 2871 aaKnown RBP21.32■■□□□ 1
CCDC40-206ENST00000572083 IL18RAPO95256 599 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 NFATC1O95644 943 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 ABCD1P33897 745 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 UBA7P41226 1012 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 PNPLA4P41247 253 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 SCARA3Q6AZY7 606 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 OSTM1Q86WC4 334 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 SPATA2LQ8IUW3 424 aaPredicted RBP21.31■■□□□ 1
CCDC40-206ENST00000572083 FSIP1Q8NA03 581 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 RASSF8Q8NHQ8 419 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 CCDC26Q8TAB7 109 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 RAD54LQ92698 747 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 AK8Q96MA6 479 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 PTPRDP23468 1912 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 NBEAQ8NFP9 2946 aa21.31■■□□□ 1
CCDC40-206ENST00000572083 HYAL3O43820 417 aaPredicted RBP21.3■■□□□ 1
CCDC40-206ENST00000572083 HUS1O60921 280 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 HNRNPLP14866 589 aaKnown RBP eCLIP21.3■■□□□ 1
CCDC40-206ENST00000572083 ADSSP30520 456 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 MAPK8P45983 427 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 MYL7Q01449 175 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 CRY1Q16526 586 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 GAB4Q2WGN9 574 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 TRIM61Q5EBN2 209 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 TMEM92Q6UXU6 159 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 NT5DC4Q86YG4 428 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 SFTPA1Q8IWL2 248 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 C1orf127Q8N9H9 656 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 ZSWIM2Q8NEG5 633 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 RLN3Q8WXF3 142 aa21.3■■□□□ 1
CCDC40-206ENST00000572083 ATXN2Q99700 1313 aaKnown RBP21.29■■□□□ 1
CCDC40-206ENST00000572083 TNRC6BQ9UPQ9 1833 aaKnown RBP21.29■■□□□ 1
CCDC40-206ENST00000572083 HDCP19113 662 aa21.29■■□□□ 1
CCDC40-206ENST00000572083 ZXDBP98169 803 aa21.29■■□□□ 1
CCDC40-206ENST00000572083 CFAP221Q4G0U5 840 aa21.29■■□□□ 1
CCDC40-206ENST00000572083 TMEM86AQ8N2M4 240 aa21.29■■□□□ 1
CCDC40-206ENST00000572083 FRMD1Q8N878 549 aa21.29■■□□□ 1
CCDC40-206ENST00000572083 SAAL1Q96ER3 474 aa21.29■■□□□ 1
CCDC40-206ENST00000572083 FAM213AQ9BRX8 229 aa21.29■■□□□ 1
CCDC40-206ENST00000572083 EVLQ9UI08 416 aaPredicted RBP21.29■■□□□ 1
CCDC40-206ENST00000572083 ARHGAP26Q9UNA1 814 aa21.29■■□□□ 1
CCDC40-206ENST00000572083 ASCC3Q8N3C0 2202 aaKnown RBP21.28■■□□□ 1
CCDC40-206ENST00000572083 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 SLC26A4O43511 780 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 PTGER3P43115 390 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 POU5F1Q01860 360 aaKnown RBP21.28■■□□□ 1
CCDC40-206ENST00000572083 GRIN1Q05586 938 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 LMAN2Q12907 356 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 SFR1Q86XK3 245 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 TMEFF1Q8IYR6 380 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 ADGRF2Q8IZF7 708 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 ALLCQ8N6M5 410 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 OLIG1Q8TAK6 271 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 LARP4BQ92615 738 aaKnown RBP21.28■■□□□ 1
CCDC40-206ENST00000572083 SPACA7Q96KW9 195 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 FNBP1Q96RU3 617 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 NUSAP1Q9BXS6 441 aaKnown RBP21.28■■□□□ 1
CCDC40-206ENST00000572083 ST6GALNAC4Q9H4F1 302 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 TMEM74BQ9NUR3 256 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 KLK13Q9UKR3 277 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 SNX9Q9Y5X1 595 aa21.28■■□□□ 1
CCDC40-206ENST00000572083 LEFTY2O00292 366 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 SCAMP3O14828 347 aaKnown RBP21.27■■□□□ 1
CCDC40-206ENST00000572083 ALDH1A2O94788 518 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 CYP17A1P05093 508 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 KRT19P08727 400 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 TCF3P15923 654 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 KCNA1Q09470 495 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 MESP2Q0VG99 397 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 LPCAT2Q7L5N7 544 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 CSGALNACT2Q8N6G5 542 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 TXNDC5Q8NBS9 432 aaKnown RBP21.27■■□□□ 1
CCDC40-206ENST00000572083 SLC32A1Q9H598 525 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 ZDHHC4Q9NPG8 344 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 KIF3AQ9Y496 699 aa21.27■■□□□ 1
CCDC40-206ENST00000572083 MAP3K13O43283 966 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 EIF5BO60841 1220 aaKnown RBP21.26■□□□□ 0.99
CCDC40-206ENST00000572083 KLF8O95600 359 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms