RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 NR2F2P24468 414 aa32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 CCNE1P24864 410 aa32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 KPNA1P52294 538 aaPredicted RBP32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 MLLT6P55198 1093 aaPredicted RBP32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 ZNF667Q5HYK9 610 aa32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 MON1AQ86VX9 555 aa32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 MAML2Q8IZL2 1156 aaPredicted RBP32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 ZNF687Q8N1G0 1237 aa32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 NKD2Q969F2 451 aaPredicted RBP32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 ELMO3Q96BJ8 720 aa32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 THG1LQ9NWX6 298 aaKnown RBP32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 CCL26Q9Y258 94 aa32.37■■■□□ 2.77
CTDNEP1-206ENST00000571409 GREB1Q4ZG55 1949 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 PRR23AA6NEV1 266 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 SOX9P48436 509 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 PLCB2Q00722 1185 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 NFIL3Q16649 462 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 ZACNQ401N2 412 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 FMR1NBQ8N0W7 255 aaPredicted RBP32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 TTC8Q8TAM2 541 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 USP13Q92995 863 aaPredicted RBP32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 SPATA17Q96L03 361 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 C8orf33Q9H7E9 229 aaPredicted RBP32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 TDP1Q9NUW8 608 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 GTSE1Q9NYZ3 720 aa32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 ZNF638Q14966 1978 aaKnown RBP32.36■■■□□ 2.77
CTDNEP1-206ENST00000571409 KIF26AQ9ULI4 1882 aaPredicted RBP32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 MAPK13O15264 365 aa32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 ANXA13P27216 316 aa32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 RAP1GAPP47736 663 aa32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 CDH8P55286 799 aa32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 SCARA5Q6ZMJ2 495 aa32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 MSANTD3Q96H12 275 aa32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 TRPC7Q9HCX4 862 aa32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 R4GN57 208 aa32.35■■■□□ 2.77
CTDNEP1-206ENST00000571409 IKBKBO14920 756 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 TRIM66O15016 1216 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 VAMP7P51809 220 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 PNOCQ13519 176 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 C1orf220Q5T0J3 134 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 SV2AQ7L0J3 742 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 B3GALNT2Q8NCR0 500 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 CEP295NLQ96MC4 621 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 KIF9Q9HAQ2 790 aa32.34■■■□□ 2.77
CTDNEP1-206ENST00000571409 AKAP3O75969 853 aa32.33■■■□□ 2.77
CTDNEP1-206ENST00000571409 TNK2Q07912 1038 aa32.33■■■□□ 2.77
CTDNEP1-206ENST00000571409 SGSM1Q2NKQ1 1148 aa32.33■■■□□ 2.77
CTDNEP1-206ENST00000571409 C1orf228Q6PIY5 440 aa32.33■■■□□ 2.77
CTDNEP1-206ENST00000571409 DENND5BQ6ZUT9 1274 aa32.33■■■□□ 2.77
CTDNEP1-206ENST00000571409 SMYD4Q8IYR2 804 aaPredicted RBP32.33■■■□□ 2.77
CTDNEP1-206ENST00000571409 FBXO4Q9UKT5 387 aa32.33■■■□□ 2.77
CTDNEP1-206ENST00000571409 F8VP50 259 aa32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 SPECC1L-ADORA2AF8WAN1 911 aa32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 RPL13P26373 211 aaKnown RBP32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 ZNF518BQ9C0D4 1074 aa32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 ELOVL4Q9GZR5 314 aa32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 SDCBP2Q9H190 292 aa32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 LMAN1LQ9HAT1 526 aa32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 GKN1Q9NS71 199 aa32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 CACNA1IQ9P0X4 2223 aa32.32■■■□□ 2.76
CTDNEP1-206ENST00000571409 DMDP11532 3685 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 P4HA1P13674 534 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 CTHP32929 405 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 PIK3CAP42336 1068 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 USP46P62068 366 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 CSTF1Q05048 431 aaKnown RBP32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 ADAM9Q13443 819 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 ZNF268Q14587 947 aaPredicted RBP32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 ZCWPW2Q504Y3 356 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 ZC3H14Q6PJT7 736 aaKnown RBP32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 INTS8Q75QN2 995 aaKnown RBP32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 RALGPS2Q86X27 583 aaPredicted RBP32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 FAM186BQ8IYM0 893 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 C8orf48Q96LL4 319 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 CYP2S1Q96SQ9 504 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 B3GNT5Q9BYG0 378 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 CHRDQ9H2X0 955 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 ANAPC1Q9H1A4 1944 aa32.31■■■□□ 2.76
CTDNEP1-206ENST00000571409 TRAV19A0A0A6YYK7 116 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 CLDN5O00501 218 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 TRIM49P0CI25 452 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 TRIM49CP0CI26 452 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 KRT13P13646 458 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 PSMC2P35998 433 aaKnown RBP32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 CACNA2D1P54289 1103 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 MTAPQ13126 283 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 TXNDC11Q6PKC3 985 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 ENGASEQ8NFI3 743 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 RIN3Q8TB24 985 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 TAF4BQ92750 862 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 SLC22A12Q96S37 553 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 RMND1Q9NWS8 449 aa32.3■■■□□ 2.76
CTDNEP1-206ENST00000571409 C2orf78A6NCI8 922 aa32.29■■■□□ 2.76
CTDNEP1-206ENST00000571409 HLA-DRAP01903 254 aa32.29■■■□□ 2.76
CTDNEP1-206ENST00000571409 CKMP06732 381 aa32.29■■■□□ 2.76
CTDNEP1-206ENST00000571409 USP17L7P0C7H9 530 aa32.29■■■□□ 2.76
CTDNEP1-206ENST00000571409 CHRNB1P11230 501 aa32.29■■■□□ 2.76
CTDNEP1-206ENST00000571409 ITPRIPL2Q3MIP1 535 aa32.29■■■□□ 2.76
CTDNEP1-206ENST00000571409 ZNF528Q3MIS6 628 aa32.29■■■□□ 2.76
CTDNEP1-206ENST00000571409 ARL14EPQ8N8R7 260 aaPredicted RBP32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms