RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 TTC8Q8TAM2 541 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 SPATA20Q8TB22 786 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 MYCBPAPQ8TBZ2 947 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 BPIFB1Q8TDL5 484 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 MRPS31Q92665 395 aaKnown RBP5.77□□□□□ -1.49
CHD3-212ENST00000570758 IRF7Q92985 503 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 USP13Q92995 863 aaPredicted RBP5.77□□□□□ -1.49
CHD3-212ENST00000570758 CLDN23Q96B33 292 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 EEF2KMTQ96G04 330 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 TRMT2BQ96GJ1 504 aaKnown RBP5.77□□□□□ -1.49
CHD3-212ENST00000570758 SPATA17Q96L03 361 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 MYRFLQ96LU7 910 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 SLC22A12Q96S37 553 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 BCO2Q9BYV7 579 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 OSBPL6Q9BZF3 934 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 ZNF518BQ9C0D4 1074 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 APOBEC3GQ9HC16 384 aaKnown RBP5.77□□□□□ -1.49
CHD3-212ENST00000570758 TRPC7Q9HCX4 862 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 TRPV5Q9NQA5 729 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 GKN1Q9NS71 199 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 OBP2AQ9NY56 170 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 GCNT4Q9P109 453 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 HMGXB4Q9UGU5 601 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 NDRG2Q9UN36 371 aaKnown RBP5.77□□□□□ -1.49
CHD3-212ENST00000570758 PCDHA5Q9Y5H7 936 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 PIAS3Q9Y6X2 628 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 TRIOO75962 3097 aa5.77□□□□□ -1.49
CHD3-212ENST00000570758 NUP210Q8TEM1 1887 aaPredicted RBP5.77□□□□□ -1.49
CHD3-212ENST00000570758 PTPRDP23468 1912 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 TICRRQ7Z2Z1 1910 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 C2orf78A6NCI8 922 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 GOLGA6L4A6NEF3 574 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 F8VP50 259 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 MAN2B1O00754 1011 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 IKBKBO14920 756 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 GFRA3O60609 400 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 CLSTN1O94985 981 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ASS1P00966 412 aaKnown RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 SP9P0CG40 484 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 CHRNB1P11230 501 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ARSAP15289 507 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 DDX6P26196 483 aaKnown RBP eCLIP5.76□□□□□ -1.49
CHD3-212ENST00000570758 PSMC2P35998 433 aaKnown RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 NBL1P41271 181 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ASPAP45381 313 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 KPNA1P52294 538 aaPredicted RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 NDST1P52848 882 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 PMS1P54277 932 aaKnown RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 MCCD1P59942 119 aaPredicted RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 ADAM9Q13443 819 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ZNF268Q14587 947 aaPredicted RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 SGSM1Q2NKQ1 1148 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 EDRF1Q3B7T1 1238 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ARHGAP29Q52LW3 1261 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 COBLL1Q53SF7 1204 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ZNF658Q5TYW1 1059 aaPredicted RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 ANKRD40Q6AI12 368 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 TRIM68Q6AZZ1 485 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ISM2Q6H9L7 571 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 TXNDC11Q6PKC3 985 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ACOT1Q86TX2 421 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 FAM35AQ86V20 835 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ZC3H3Q8IXZ2 948 aaKnown RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 CELF5Q8N6W0 485 aaKnown RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 ARL14EPQ8N8R7 260 aaPredicted RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 CSGALNACT1Q8TDX6 532 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 TAS1R2Q8TE23 839 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 FAM3CQ92520 227 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 SEMA4DQ92854 862 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 SMARCE1Q969G3 411 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 C8orf48Q96LL4 319 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 TIGD1Q96MW7 591 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 GSDMAQ96QA5 445 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 TWNKQ96RR1 684 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 CYP2S1Q96SQ9 504 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 NELL2Q99435 816 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 FAM83CQ9BQN1 747 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 TTLL2Q9BWV7 592 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 ELOVL4Q9GZR5 314 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 C8orf33Q9H7E9 229 aaPredicted RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 MMRN2Q9H8L6 949 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 LMAN1LQ9HAT1 526 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 TMEM8AQ9HCN3 771 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 HPS4Q9NQG7 708 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 RBM12Q9NTZ6 932 aaKnown RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 TDP1Q9NUW8 608 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 SPATA6Q9NWH7 488 aaPredicted RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 RMND1Q9NWS8 449 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 GTSE1Q9NYZ3 720 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 UXTQ9UBK9 157 aaPredicted RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 MAN1B1Q9UKM7 699 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 MRPS17Q9Y2R5 130 aaKnown RBP5.76□□□□□ -1.49
CHD3-212ENST00000570758 R4GN57 208 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 OBSL1O75147 1896 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 GREB1Q4ZG55 1949 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 MIA3Q5JRA6 1907 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 DENND4CQ5VZ89 1909 aa5.76□□□□□ -1.49
CHD3-212ENST00000570758 CACNA1HO95180 2353 aa5.75□□□□□ -1.49
CHD3-212ENST00000570758 KIF26AQ9ULI4 1882 aaPredicted RBP5.75□□□□□ -1.49
CHD3-212ENST00000570758 TRAV19A0A0A6YYK7 116 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms