RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 RSPO2Q6UXX9 243 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 MON1BQ7L1V2 547 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 ERICH1Q86X53 443 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 PHF13Q86YI8 300 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 WDTC1Q8N5D0 677 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 FBXO22Q8NEZ5 403 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 ATRIPQ8WXE1 791 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 CTNNBL1Q8WYA6 563 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 ZNF653Q96CK0 615 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 TRIM11Q96F44 468 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 PPP1R13BQ96KQ4 1090 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 DUSP16Q9BY84 665 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 RHOBTB2Q9BYZ6 727 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 TSGA10Q9BZW7 698 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 SYNCQ9H7C4 482 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 MRPL17Q9NRX2 175 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 ABI2Q9NYB9 513 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 ADAM22Q9P0K1 906 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 CYTH4Q9UIA0 394 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 INTUQ9ULD6 942 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 PCDHB5Q9Y5E4 795 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 ANKRD62A6NC57 917 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 ADAM12O43184 909 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 CSPG5O95196 566 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 CALB1P05937 261 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 RB1P06400 928 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 TMEM253P0C7T8 217 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 CTSAP10619 480 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 BDNFP23560 247 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 RGS7P49802 495 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 ERVK-21P61565 698 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 CREMQ03060 361 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 C1QBPQ07021 282 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 KIF5AQ12840 1032 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 PTPN14Q15678 1187 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 PTPN20Q4JDL3 420 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 LIN9Q5TKA1 542 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 SLC8B1Q6J4K2 584 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 MCOLN2Q8IZK6 566 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 PGLYRP2Q96PD5 576 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 LZTFL1Q9NQ48 299 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 ENTPD7Q9NQZ7 604 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 ST7Q9NRC1 585 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 SSX2IPQ9Y2D8 614 aa16.29■□□□□ 0.2
HERPUD1-219ENST00000570273 MTMR11A4FU01 709 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 TULP2O00295 520 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 XPO1O14980 1071 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 ATMINO43313 823 aaPredicted RBP16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 MYBL1P10243 752 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 MMP8P22894 467 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 OR1D2P34982 312 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 MAP3K7CLP57077 242 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 ROR1Q01973 937 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 UBE3AQ05086 875 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 SMARCB1Q12824 385 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 GPR17Q13304 367 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 C2CD6Q53TS8 623 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 PPP2R2DQ66LE6 453 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 CLEC20AQ6ZU45 233 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 TMC7Q7Z402 723 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 REXO1L1PQ8IX06 675 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 GPR65Q8IYL9 337 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 POF1BQ8WVV4 589 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 FUBP3Q96I24 572 aaKnown RBP eCLIP16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 CPXM1Q96SM3 734 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 SMOQ99835 787 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 TCF25Q9BQ70 676 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 CLSTN3Q9BQT9 956 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 LACRTQ9GZZ8 138 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 THAP2Q9H0W7 228 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 DMAP1Q9NPF5 467 aaPredicted RBP16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 KCND1Q9NSA2 647 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 TRIM10Q9UDY6 481 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 NCANO14594 1321 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 GOLGA6L9A6NEM1 432 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 PJA2O43164 708 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 KRT86O43790 486 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 ARHGAP25P42331 645 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 PLA2G4AP47712 749 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 CACNA2D1P54289 1103 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 GPC5P78333 572 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 CFAP221Q4G0U5 840 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 CYP4A22Q5TCH4 519 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 PLPP4Q5VZY2 271 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 PMF1Q6P1K2 205 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 RNF19BQ6ZMZ0 732 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 NLRC5Q86WI3 1866 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 SPPL3Q8TCT6 385 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 SLC35F5Q8WV83 523 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 ARHGEF26Q96DR7 871 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 TLR9Q9NR96 1032 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms