RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CYFIP2Q96F07 1278 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 PGLYRP2Q96PD5 576 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 ELOVL4Q9GZR5 314 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 DPEP3Q9H4B8 488 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 CYP4F11Q9HBI6 524 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 ZNHIT6Q9NWK9 470 aaKnown RBP17.02■□□□□ 0.32
USB1-215ENST00000569252 ABI2Q9NYB9 513 aaPredicted RBP17.02■□□□□ 0.32
USB1-215ENST00000569252 HESX1Q9UBX0 185 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 AFF4Q9UHB7 1163 aaKnown RBP17.02■□□□□ 0.32
USB1-215ENST00000569252 A0A1W2PQJ5 194 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 F8VZ95 297 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 CYP26A1O43174 497 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 ADAM12O43184 909 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 TGM5O43548 720 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 ATF2P15336 505 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 ALDH1A3P47895 512 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 DUSP6Q16828 381 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 SFMBT2Q5VUG0 894 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 DPY19L2P1Q6NXN4 242 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 RNF19BQ6ZMZ0 732 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 SLC4A11Q8NBS3 891 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
USB1-215ENST00000569252 TMEM209Q96SK2 561 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 PLEKHA4Q9H4M7 779 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 CAPN11Q9UMQ6 739 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 CNTN6Q9UQ52 1028 aa17.01■□□□□ 0.31
USB1-215ENST00000569252 WDR27A2RRH5 827 aa17■□□□□ 0.31
USB1-215ENST00000569252 AP5Z1O43299 807 aa17■□□□□ 0.31
USB1-215ENST00000569252 THAP12O43422 761 aa17■□□□□ 0.31
USB1-215ENST00000569252 HCRTO43612 131 aa17■□□□□ 0.31
USB1-215ENST00000569252 GFPT2O94808 682 aa17■□□□□ 0.31
USB1-215ENST00000569252 ABLIM3O94929 683 aa17■□□□□ 0.31
USB1-215ENST00000569252 SPATA31D3P0C874 917 aa17■□□□□ 0.31
USB1-215ENST00000569252 FERP16591 822 aa17■□□□□ 0.31
USB1-215ENST00000569252 ANXA13P27216 316 aa17■□□□□ 0.31
USB1-215ENST00000569252 GNA15P30679 374 aa17■□□□□ 0.31
USB1-215ENST00000569252 KRT9P35527 623 aa17■□□□□ 0.31
USB1-215ENST00000569252 GRIK1P39086 918 aa17■□□□□ 0.31
USB1-215ENST00000569252 PDE6CP51160 858 aa17■□□□□ 0.31
USB1-215ENST00000569252 CLCN4P51793 760 aa17■□□□□ 0.31
USB1-215ENST00000569252 ZBED6P86452 979 aa17■□□□□ 0.31
USB1-215ENST00000569252 ARID5AQ03989 594 aa17■□□□□ 0.31
USB1-215ENST00000569252 DUSP4Q13115 394 aa17■□□□□ 0.31
USB1-215ENST00000569252 MGAT5BQ3V5L5 792 aa17■□□□□ 0.31
USB1-215ENST00000569252 SPATA31D4Q6ZUB0 917 aa17■□□□□ 0.31
USB1-215ENST00000569252 RTL10Q7L3V2 364 aa17■□□□□ 0.31
USB1-215ENST00000569252 LRRTM3Q86VH5 581 aa17■□□□□ 0.31
USB1-215ENST00000569252 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
USB1-215ENST00000569252 UBR7Q8N806 425 aa17■□□□□ 0.31
USB1-215ENST00000569252 C12orf29Q8N999 325 aa17■□□□□ 0.31
USB1-215ENST00000569252 KREMEN2Q8NCW0 462 aa17■□□□□ 0.31
USB1-215ENST00000569252 WHAMMQ8TF30 809 aa17■□□□□ 0.31
USB1-215ENST00000569252 HDAC7Q8WUI4 952 aa17■□□□□ 0.31
USB1-215ENST00000569252 CASP10Q92851 521 aa17■□□□□ 0.31
USB1-215ENST00000569252 MYLPFQ96A32 169 aa17■□□□□ 0.31
USB1-215ENST00000569252 ASIC4Q96FT7 647 aa17■□□□□ 0.31
USB1-215ENST00000569252 PCED1BQ96HM7 432 aa17■□□□□ 0.31
USB1-215ENST00000569252 TWNKQ96RR1 684 aa17■□□□□ 0.31
USB1-215ENST00000569252 ABCB6Q9NP58 842 aa17■□□□□ 0.31
USB1-215ENST00000569252 CRTAC1Q9NQ79 661 aa17■□□□□ 0.31
USB1-215ENST00000569252 HSFX1Q9UBD0 423 aa17■□□□□ 0.31
USB1-215ENST00000569252 HMGXB4Q9UGU5 601 aa17■□□□□ 0.31
USB1-215ENST00000569252 SPTBN4Q9H254 2564 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 RNF225M0QZC1 329 aaPredicted RBP16.99■□□□□ 0.31
USB1-215ENST00000569252 EPHB6O15197 1021 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 BDNFP23560 247 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 ADORA2BP29275 332 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 JAM2P57087 298 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 RPL10AP62906 217 aaKnown RBP16.99■□□□□ 0.31
USB1-215ENST00000569252 PLD1Q13393 1074 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 CBX2Q14781 532 aaPredicted RBP16.99■□□□□ 0.31
USB1-215ENST00000569252 TAF12Q16514 161 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 ASIC2Q16515 512 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 VSTM1Q6UX27 236 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.99■□□□□ 0.31
USB1-215ENST00000569252 CNGA4Q8IV77 575 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 SUGP1Q8IWZ8 645 aaKnown RBP16.99■□□□□ 0.31
USB1-215ENST00000569252 ELMOD1Q8N336 334 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 FBXL6Q8N531 539 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 SLC2A14Q8TDB8 520 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 SEPT5Q99719 369 aaPredicted RBP16.99■□□□□ 0.31
USB1-215ENST00000569252 HNRNPABQ99729 332 aaKnown RBP16.99■□□□□ 0.31
USB1-215ENST00000569252 FAM49BQ9NUQ9 324 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 AJAP1Q9UKB5 411 aaPredicted RBP16.99■□□□□ 0.31
USB1-215ENST00000569252 SLC27A5Q9Y2P5 690 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 CEP83Q9Y592 693 aa16.99■□□□□ 0.31
USB1-215ENST00000569252 MTMR11A4FU01 709 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 AKR1B15C9JRZ8 316 aaPredicted RBP16.98■□□□□ 0.31
USB1-215ENST00000569252 TRIM66O15016 1216 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 LRG1P02750 347 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 FAM200BP0CF97 657 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 CASP14P31944 242 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 ZNF132P52740 706 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 CNGA2Q16280 664 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 CFAP221Q4G0U5 840 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 PPM1LQ5SGD2 360 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 PPP1R26Q5T8A7 1209 aaPredicted RBP16.98■□□□□ 0.31
USB1-215ENST00000569252 ARHGAP17Q68EM7 881 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 LILRA6Q6PI73 481 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 SCN4BQ8IWT1 228 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms