RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 MKLN1Q9UL63 735 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ASAP1Q9ULH1 1129 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PCDHB2Q9Y5E7 798 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 POLR1AO95602 1720 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 TRIM13O60858 407 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PRDM1O75626 825 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 QPRTQ15274 297 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 TRIP4Q15650 581 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 DENND5AQ6IQ26 1287 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 LINC00523Q86TU6 105 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SLC22A9Q8IVM8 553 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 OSCARQ8IYS5 282 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PROX1Q92786 737 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 FAM89AQ96GI7 184 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SELENONQ9NZV5 590 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 TRIM49BA6NDI0 452 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 DDX3XO00571 662 aaKnown RBP eCLIP7.37□□□□□ -1.233e-9■■□□□ 11.9
CNOT1-216ENST00000569240 MPOP05164 745 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 MSH3P20585 1137 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 CASP5P51878 434 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 EIF3EP60228 445 aaKnown RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 CDK18Q07002 472 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 WASHC5Q12768 1159 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 C12orf60Q5U649 245 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 CIAPIN1Q6FI81 312 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 NIPAL1Q6NVV3 410 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 NCCRP1Q6ZVX7 275 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 C8orf59Q8N0T1 100 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 TAGAPQ8N103 731 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 FBXW8Q8N3Y1 598 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PCYOX1Q9UHG3 505 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PCDHA1Q9Y5I3 950 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 RBP1P09455 135 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 GTF2H1P32780 548 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 HERVK_113P62684 666 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 CSNK2BP67870 215 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 AMPD2Q01433 879 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF211Q13398 564 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PTK6Q13882 451 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 GRM4Q14833 912 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SAMD3Q8N6K7 520 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 LRRC17Q8N6Y2 441 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 STRBPQ96SI9 672 aaKnown RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 KLHL8Q9P2G9 620 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 ITGA11Q9UKX5 1188 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 NIP7Q9Y221 180 aaKnown RBP eCLIP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 GSAPA4D1B5 854 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 CCDC182A6NF36 153 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 TRAFD1O14545 582 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SEC24AO95486 1093 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 ANXA6P08133 673 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 GLI1P08151 1106 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SAT1P21673 171 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 WARSP23381 471 aaKnown RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PTGS2P35354 604 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SLC18A1P54219 525 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 IMPG1Q17R60 797 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 ZFP69Q49AA0 526 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 C11orf88Q6PI97 169 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 MAPKAPK5Q8IW41 473 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 FBXO25Q8TCJ0 367 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 C9orf72Q96LT7 481 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PHF20Q9BVI0 1012 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SLC13A1Q9BZW2 595 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 CDH19Q9H159 772 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 LY9Q9HBG7 655 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 KIAA0556O60303 1618 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PNPLA6Q8IY17 1366 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SFI1A8K8P3 1242 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 ATP9BO43861 1147 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SERPINA6P08185 405 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 MMRN1Q13201 1228 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 LRRC41Q15345 812 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 MAPK6Q16659 721 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF572Q7Z3I7 529 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 KRT28Q7Z3Y7 464 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PACRGLQ8N7B6 248 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 RAB2BQ8WUD1 216 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 AFG1LQ8WV93 481 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 SLC7A3Q8WY07 619 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 TMCO6Q96DC7 493 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 UBXN6Q9BZV1 441 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 EXOSC4Q9NPD3 245 aaKnown RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 LRRC42Q9Y546 428 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 TRIM17Q9Y577 477 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 ARPC4-TTLL3A0A0A6YYG9 625 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 MAGEB16A2A368 324 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 TRIM49D1C9J1S8 452 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 LOC110117498-PIK3R3F6TDL0 507 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PDPK2PQ6A1A2 396 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 HAUS6Q7Z4H7 955 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 RP9Q8TA86 221 aaKnown RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 RNASE11Q8TAA1 199 aaKnown RBP7.37□□□□□ -1.23
CNOT1-216ENST00000569240 PIK3R3Q92569 461 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 OSBP2Q969R2 916 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 ULK4Q96C45 1275 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 NCKIPSDQ9NZQ3 722 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 NAALADL1Q9UQQ1 740 aa7.37□□□□□ -1.23
CNOT1-216ENST00000569240 CLUHO75153 1309 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 DPPA5A6NC42 116 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms