RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 RRP9O43818 475 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 ZNF623O75123 536 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 CAPN15O75808 1086 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 RNF8O76064 485 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 RARAP10276 462 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 PDGFRAP16234 1089 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 CETN2P41208 172 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 KCNJ1P48048 391 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 ATP11AP98196 1134 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 MBTPS1Q14703 1052 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 CASP8Q14790 479 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 TAF5Q15542 800 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 PPP1R15BQ5SWA1 713 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 TXNRD3NBQ6F5E7 133 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 CCDC137Q6PK04 289 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 ECHDC2Q86YB7 292 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 ZDHHC14Q8IZN3 488 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 TOP6BLQ8N6T0 577 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 PRELID2Q8N945 189 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 SLITRK6Q9H5Y7 841 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 UTP11Q9Y3A2 253 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 TDRD15B5MCY1 1934 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 DAPK3O43293 454 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 SKIP12755 728 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 KRT10P13645 584 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 HSPA6P17066 643 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 BRCC3P46736 316 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 SLC8A3P57103 927 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 RNASELQ05823 741 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 DSC3Q14574 896 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 HADHQ16836 314 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 MDH1BQ5I0G3 518 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 FAM26DQ5JW98 314 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 GLB1LQ6UWU2 654 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 LRRC8DQ7L1W4 858 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 MRPL10Q7Z7H8 261 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 CASKIN2Q8WXE0 1202 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 ATG4AQ8WYN0 398 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 OSBPL8Q9BZF1 889 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 DNM1LO00429 736 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 PHF2O75151 1096 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 LRCH4O75427 683 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 PTPN1P18031 435 aaKnown RBP7.43□□□□□ -1.22
SMG1-215ENST00000568239 MAN1A1P33908 653 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 FLT3P36888 993 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 GABRB2P47870 512 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 BCAT1P54687 386 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 FAM193AP78312 1265 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 BST2Q10589 180 aaKnown RBP7.43□□□□□ -1.22
SMG1-215ENST00000568239 PPP2R5EQ16537 467 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 UPP1Q16831 310 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 C15orf59Q2T9L4 293 aaPredicted RBP7.43□□□□□ -1.22
SMG1-215ENST00000568239 TIGD5Q53EQ6 642 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 SCYL2Q6P3W7 929 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 SLC24A5Q71RS6 500 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 RTN4RL1Q86UN2 441 aaPredicted RBP7.43□□□□□ -1.22
SMG1-215ENST00000568239 CRYBG2Q8N1P7 616 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 ANKRD52Q8NB46 1076 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 SLC35F5Q8WV83 523 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 RXFP2Q8WXD0 754 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 MCRS1Q96EZ8 462 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 CCDC114Q96M63 670 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 CFAP57Q96MR6 1250 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 NGRNQ9NPE2 291 aaKnown RBP7.43□□□□□ -1.22
SMG1-215ENST00000568239 PHF24Q9UPV7 400 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 TET1Q8NFU7 2136 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 F8W810 466 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 CAND2O75155 1236 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 SELPP16109 830 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 GPD1P21695 349 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 WARSP23381 471 aaKnown RBP7.43□□□□□ -1.22
SMG1-215ENST00000568239 TKTP29401 623 aaKnown RBP7.43□□□□□ -1.22
SMG1-215ENST00000568239 CHRNA3P32297 505 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 RPL9P32969 192 aaKnown RBP7.43□□□□□ -1.22
SMG1-215ENST00000568239 RABGGTBP53611 331 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 EPHB4P54760 987 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 SNX16P57768 344 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 GRIK3Q13003 919 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 TUSC3Q13454 348 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 SH3PXD2AQ5TCZ1 1133 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 ARHGAP17Q68EM7 881 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 KATNAL2Q8IYT4 538 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 ABI1Q8IZP0 508 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 DBF4BQ8NFT6 615 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 EXD1Q8NHP7 514 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 CLEC4CQ8WTT0 213 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 HSPH1Q92598 858 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 FAM149B1Q96BN6 582 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 HERPUD2Q9BSE4 406 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 UBN1Q9NPG3 1134 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 GDF3Q9NR23 364 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 CHST7Q9NS84 486 aa7.43□□□□□ -1.22
SMG1-215ENST00000568239 PAPSS1O43252 624 aaPredicted RBP7.42□□□□□ -1.22
SMG1-215ENST00000568239 CCL5P13501 91 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 MIPP30301 263 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 OR1G1P47890 313 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 LHX1P48742 406 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 MAP3K7CLP57077 242 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 DYNLT1P63172 113 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SLC6A3Q01959 620 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms