RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 IZUMO2Q6UXV1 221 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 GET4Q7L5D6 327 aaPredicted RBP5.72□□□□□ -1.49
LINC01541-202ENST00000568095 CHSY1Q86X52 802 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 CPNE8Q86YQ8 564 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 SLC9A9Q8IVB4 645 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 ZNF280CQ8ND82 737 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 ETNPPLQ8TBG4 499 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 PIP4K2CQ8TBX8 421 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 CDCA5Q96FF9 252 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 PRR11Q96HE9 360 aaPredicted RBP5.72□□□□□ -1.49
LINC01541-202ENST00000568095 PWWP2AQ96N64 755 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 PANX3Q96QZ0 392 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 FNBP1Q96RU3 617 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 WRNIP1Q96S55 665 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 FIZ1Q96SL8 496 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 HERPUD2Q9BSE4 406 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 SUDS3Q9H7L9 328 aaPredicted RBP5.72□□□□□ -1.49
LINC01541-202ENST00000568095 NPHS2Q9NP85 383 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 FBXO28Q9NVF7 368 aa5.72□□□□□ -1.49
LINC01541-202ENST00000568095 IGLV3-22A0A075B6J6 115 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L15C9J2P7 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L13C9JLJ4 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L11C9JVI0 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L18D6R9N7 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L22D6RA61 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L17D6RBQ6 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L19D6RCP7 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L20D6RJB6 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 KLF11O14901 512 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 CLDN3O15551 220 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ZNF862O60290 1169 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 FKBP6O75344 327 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 TROVE2P10155 538 aaKnown RBP eCLIP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 CD46P15529 392 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 RPA1P27694 616 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ABCD1P33897 745 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 CCNFP41002 786 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 USP17L24Q0WX57 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 PPP2R5CQ13362 524 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 THOC5Q13769 683 aaKnown RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 MYBPC2Q14324 1141 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 PRKD1Q15139 912 aaPredicted RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 CCNG2Q16589 344 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 UBE2SQ16763 222 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 Q4G0T1 1027 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 EFHC2Q5JST6 749 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 KLC3Q6P597 504 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 BORAQ6PGQ7 559 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 CATSPER3Q86XQ3 398 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 TMPRSS6Q8IU80 811 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 FAM186BQ8IYM0 893 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ARHGAP24Q8N264 748 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 FAM172AQ8WUF8 416 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 C1orf54Q8WWF1 131 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 STMN2Q93045 179 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 MAML3Q96JK9 1138 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 STRA6Q9BX79 667 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 AMNQ9BXJ7 453 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 MAK16Q9BXY0 300 aaKnown RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 GLT8D2Q9H1C3 349 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 EBF3Q9H4W6 596 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 TIMMDC1Q9NPL8 285 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 HEY2Q9UBP5 337 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ASIC3Q9UHC3 531 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 GTF3C4Q9UKN8 822 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ALOX15BO15296 676 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 P4HA2O15460 535 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 HNRNPRO43390 633 aaKnown RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 PEX1O43933 1283 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 LRRN2O75325 713 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ATP6V1G1O75348 118 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 PARNO95453 639 aaKnown RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 UQCRBP14927 111 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 SLC1A1P43005 524 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 SNAP25P60880 206 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 PSMC6P62333 389 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ARHGAP4P98171 946 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 MRPL58Q14197 206 aaKnown RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 MAP7Q14244 749 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 MESDQ14696 234 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 DUS1LQ6P1R4 473 aaKnown RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 LVRNQ6Q4G3 990 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 RNF111Q6ZNA4 994 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 CATSPERGQ6ZRH7 1159 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 SH2D5Q6ZV89 423 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 NT5DC4Q86YG4 428 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 TRIM42Q8IWZ5 723 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ZBTB8BQ8NAP8 495 aaPredicted RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 SMYD1Q8NB12 490 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ZNF564Q8TBZ8 553 aaPredicted RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 DTX3LQ8TDB6 740 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 OTUD5Q96G74 571 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 CATSPER2Q96P56 530 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 TBCCD1Q9NVR7 557 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 PLK2Q9NYY3 685 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 CNTN3Q9P232 1028 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 EGFL7Q9UHF1 273 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 ZNF214Q9UL59 606 aaPredicted RBP5.71□□□□□ -1.5
LINC01541-202ENST00000568095 WDR37Q9Y2I8 494 aa5.71□□□□□ -1.5
LINC01541-202ENST00000568095 PCNTO95613 3336 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms