RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CLDN23Q96B33 292 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 RSPRY1Q96DX4 576 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 TRMT2BQ96GJ1 504 aaKnown RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 CCDC34Q96HJ3 373 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 MYRFLQ96LU7 910 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 MMS19Q96T76 1030 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 SYT15Q9BQS2 421 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 IER2Q9BTL4 223 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 PI4K2AQ9BTU6 479 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 GZF1Q9H116 711 aaPredicted RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 SNX25Q9H3E2 840 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 KCTD10Q9H3F6 313 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 SEMA4AQ9H3S1 761 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 VRTNQ9H8Y1 702 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 KIF9Q9HAQ2 790 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 DMAC2Q9NW81 257 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 EHD2Q9NZN4 543 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 MAGEC2Q9UBF1 373 aaPredicted RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 MTF2Q9Y483 593 aaPredicted RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 PIAS3Q9Y6X2 628 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 NCANO14594 1321 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 CACNA1IQ9P0X4 2223 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 PIEZO1Q92508 2521 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 LAMA1P25391 3075 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 SHISA7A6NL88 538 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 SLC38A8A6NNN8 435 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 LRRIQ3A6PVS8 624 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 IKBKBO14920 756 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 TRIM66O15016 1216 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 MAPK13O15264 365 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 LAMTOR5O43504 91 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 HCRTO43612 131 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 CALUO43852 315 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 PHACTR2O75167 634 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 ATP2C2O75185 946 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 LRRN2O75325 713 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 ZNF202O95125 648 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 PRAMEF12O95522 483 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 F11P03951 625 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 NR3C1P04150 777 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 PDGFRBP09619 1106 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 SP9P0CG40 484 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 P4HA1P13674 534 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 TARSP26639 723 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 GNL1P36915 607 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 AVPR1AP37288 418 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 CASP4P49662 377 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 GPR15P49685 360 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 PDE6CP51160 858 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 KPNA1P52294 538 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 MYL6P60660 151 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 PSMC1P62191 440 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 NUCB2P80303 420 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 CYP27A1Q02318 531 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 ENPEPQ07075 957 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 NCOA4Q13772 614 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 ZNF268Q14587 947 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 KCNB1Q14721 858 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 NFIL3Q16649 462 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 DDR2Q16832 855 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 CCDC142Q17RM4 750 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 ZNF699Q32M78 642 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 WDR72Q3MJ13 1102 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 SDHAF4Q5VUM1 108 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 TDRD10Q5VZ19 366 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 KRBA2Q6ZNG9 492 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 ASCL5Q7RTU5 278 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 FRMD5Q7Z6J6 570 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 TMEM150AQ86TG1 271 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 RALGPS2Q86X27 583 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 HOMEZQ8IX15 550 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 MAML2Q8IZL2 1156 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 CMTM8Q8IZV2 173 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 GUF1Q8N442 669 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 CELF5Q8N6W0 485 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 MAB21L3Q8N8X9 362 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 B3GALNT2Q8NCR0 500 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 MYCBPAPQ8TBZ2 947 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 TMC2Q8TDI7 906 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 FAM3CQ92520 227 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 ZNF516Q92618 1163 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 MRPS31Q92665 395 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 MYLPFQ96A32 169 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 PCED1BQ96HM7 432 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 CHAMP1Q96JM3 812 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 SPATA17Q96L03 361 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 LRRC3BQ96PB8 259 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 SLC46A2Q9BY10 475 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 ELOVL4Q9GZR5 314 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 XYLT2Q9H1B5 865 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 GOLPH3LQ9H4A5 285 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 C8orf33Q9H7E9 229 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 CRTAC1Q9NQ79 661 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 TDP1Q9NUW8 608 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 SPATA6Q9NWH7 488 aaPredicted RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 THG1LQ9NWX6 298 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 NXF1Q9UBU9 619 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 FBXO4Q9UKT5 387 aa5.11□□□□□ -1.59
CLK3-219ENST00000567805 NDRG2Q9UN36 371 aaKnown RBP5.11□□□□□ -1.59
CLK3-219ENST00000567805 MAGED2Q9UNF1 606 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms