RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 TCHHQ07283 1943 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 NCANO14594 1321 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 MYBPHLA2RUH7 354 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 PAPSS2O95340 614 aaPredicted RBP11.94□□□□□ -0.5
CDH3-206ENST00000567674 LMNAP02545 664 aaKnown RBP11.94□□□□□ -0.5
CDH3-206ENST00000567674 PTPN1P18031 435 aaKnown RBP11.94□□□□□ -0.5
CDH3-206ENST00000567674 CASP1P29466 404 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 FAM160A1Q05DH4 1040 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 NCOA4Q13772 614 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 LRRC32Q14392 662 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 ZNF667Q5HYK9 610 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 TPRG1Q6ZUI0 275 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 DENND5BQ6ZUT9 1274 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 CRYBG2Q8N1P7 616 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 PDZD8Q8NEN9 1154 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 NOC3LQ8WTT2 800 aaKnown RBP11.94□□□□□ -0.5
CDH3-206ENST00000567674 FAM3CQ92520 227 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 NELL1Q92832 810 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 PI4K2AQ9BTU6 479 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 SLC46A2Q9BY10 475 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 IMPG2Q9BZV3 1241 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 CYP3A43Q9HB55 503 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 TMLHEQ9NVH6 421 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 PCDHGA2Q9Y5H1 932 aa11.94□□□□□ -0.5
CDH3-206ENST00000567674 SLC38A8A6NNN8 435 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 LRRIQ3A6PVS8 624 aaPredicted RBP11.93□□□□□ -0.5
CDH3-206ENST00000567674 A8MXQ7 604 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 LAMTOR5O43504 91 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 RTN3O95197 1032 aaPredicted RBP11.93□□□□□ -0.5
CDH3-206ENST00000567674 ASS1P00966 412 aaKnown RBP11.93□□□□□ -0.5
CDH3-206ENST00000567674 USP17L7P0C7H9 530 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 KRT13P13646 458 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 CYP2F1P24903 491 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 LMO2P25791 158 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 ANXA13P27216 316 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 HOXA6P31267 233 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 VIPR2P41587 438 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 VAMP7P51809 220 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 LRRC63Q05C16 580 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 ADAM9Q13443 819 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 ZNF699Q32M78 642 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 ZNF658Q5TYW1 1059 aaPredicted RBP11.93□□□□□ -0.5
CDH3-206ENST00000567674 SNX30Q5VWJ9 437 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 TDRD10Q5VZ19 366 aaKnown RBP11.93□□□□□ -0.5
CDH3-206ENST00000567674 SV2AQ7L0J3 742 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 TMEM150AQ86TG1 271 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 GRAMD1CQ8IYS0 662 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 KIAA2013Q8IYS2 634 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 TMEM130Q8N3G9 435 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 TTC9BQ8N6N2 239 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 B3GALNT2Q8NCR0 500 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 CCDC150Q8NCX0 1101 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 ENGASEQ8NFI3 743 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 OR6B3Q8NGW1 331 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 PCED1BQ96HM7 432 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 LPIN3Q9BQK8 851 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 FAM83CQ9BQN1 747 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 CHRDQ9H2X0 955 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 PNPLA8Q9NP80 782 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 HEBP1Q9NRV9 189 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 TRPM5Q9NZQ8 1165 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 PIAS3Q9Y6X2 628 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 GVINP1Q7Z2Y8 2422 aa11.93□□□□□ -0.5
CDH3-206ENST00000567674 WDR87Q6ZQQ6 2873 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 NUP210Q8TEM1 1887 aaPredicted RBP11.92□□□□□ -0.5
CDH3-206ENST00000567674 TRAV19A0A0A6YYK7 116 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 SHISA7A6NL88 538 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 CETN3O15182 167 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 PMM2O15305 246 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 SLC16A3O15427 465 aaKnown RBP11.92□□□□□ -0.5
CDH3-206ENST00000567674 NR2F2P24468 414 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 CNR2P34972 360 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 GRIK1P39086 918 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 TUBP50607 506 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 CCR3P51677 355 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 MYL6P60660 151 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 FKBP3Q00688 224 aaKnown RBP11.92□□□□□ -0.5
CDH3-206ENST00000567674 FZD5Q13467 585 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 BIRC3Q13489 604 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 UBXN2BQ14CS0 331 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 DDR2Q16832 855 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 ITPRIPL2Q3MIP1 535 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 FBXO43Q4G163 708 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 LMBRD2Q68DH5 695 aaPredicted RBP11.92□□□□□ -0.5
CDH3-206ENST00000567674 CC2D1AQ6P1N0 951 aaPredicted RBP11.92□□□□□ -0.5
CDH3-206ENST00000567674 OSTM1Q86WC4 334 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 DDX42Q86XP3 938 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDH3-206ENST00000567674 GPR161Q8N6U8 529 aaKnown RBP11.92□□□□□ -0.5
CDH3-206ENST00000567674 GIPC2Q8TF65 315 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 MYLPFQ96A32 169 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 CRTAC1Q9NQ79 661 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 PRMT8Q9NR22 394 aaPredicted RBP11.92□□□□□ -0.5
CDH3-206ENST00000567674 IL37Q9NZH6 218 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 ARHGAP26Q9UNA1 814 aa11.92□□□□□ -0.5
CDH3-206ENST00000567674 CCDC163A0A0D9SF12 145 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 FAM92AA1XBS5 289 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 SOAT2O75908 522 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 DCNP07585 359 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms