RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SMYD5Q6GMV2 418 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 GAREM2Q75VX8 874 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 TMEM150AQ86TG1 271 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 ZMIZ2Q8NF64 920 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 FGF13Q92913 245 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 TRMT2BQ96GJ1 504 aaKnown RBP13.2□□□□□ -0.3
RNF40-211ENST00000567365 SPATA17Q96L03 361 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 HNRNPABQ99729 332 aaKnown RBP13.2□□□□□ -0.3
RNF40-211ENST00000567365 CSNK1G1Q9HCP0 422 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 IL37Q9NZH6 218 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
RNF40-211ENST00000567365 LIMA1Q9UHB6 759 aaKnown RBP13.2□□□□□ -0.3
RNF40-211ENST00000567365 ZFP37Q9Y6Q3 630 aaPredicted RBP13.2□□□□□ -0.3
RNF40-211ENST00000567365 ANAPC1Q9H1A4 1944 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 ANHXE9PGG2 379 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 RNF225M0QZC1 329 aaPredicted RBP13.19□□□□□ -0.3
RNF40-211ENST00000567365 TADA3O75528 432 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 CCDC130P13994 396 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
RNF40-211ENST00000567365 CEBPBP17676 345 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 APBA1Q02410 837 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 LRMPQ12912 555 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 EXOC3L4Q17RC7 722 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 SDHAF4Q5VUM1 108 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
RNF40-211ENST00000567365 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 FAM35AQ86V20 835 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 TDRD5Q8NAT2 981 aaKnown RBP13.19□□□□□ -0.3
RNF40-211ENST00000567365 STKLD1Q8NE28 680 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 SHKBP1Q8TBC3 707 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 GPR152Q8TDT2 470 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 GIPC2Q8TF65 315 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 CRACR2AQ9BSW2 395 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 TTLL2Q9BWV7 592 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 ASAH2Q9NR71 780 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 CDH7Q9ULB5 785 aa13.19□□□□□ -0.3
RNF40-211ENST00000567365 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
RNF40-211ENST00000567365 FAM92AA1XBS5 289 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 F8VP50 259 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 ZNF197O14709 1029 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 TNFRSF10BO14763 440 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 BEST1O76090 585 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 F11P03951 625 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 CSH1P0DML2 217 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 CSH2P0DML3 217 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 SP100P23497 879 aaPredicted RBP13.18□□□□□ -0.3
RNF40-211ENST00000567365 ZNF165P49910 485 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 USP46P62068 366 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 ARHGAP17Q68EM7 881 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 GBP6Q6ZN66 633 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 PDZD4Q76G19 769 aaPredicted RBP13.18□□□□□ -0.3
RNF40-211ENST00000567365 RRAGAQ7L523 313 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 PPM1KQ8N3J5 372 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 AOPEPQ8N6M6 819 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 SLC2A14Q8TDB8 520 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 ACSF2Q96CM8 615 aaPredicted RBP13.18□□□□□ -0.3
RNF40-211ENST00000567365 CYFIP2Q96F07 1278 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 TMEM176AQ96HP8 235 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 SMOQ99835 787 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 ZSWIM1Q9BR11 485 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 NAT10Q9H0A0 1025 aaKnown RBP13.18□□□□□ -0.3
RNF40-211ENST00000567365 TAB2Q9NYJ8 693 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 GDE1Q9NZC3 331 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 APEX2Q9UBZ4 518 aa13.18□□□□□ -0.3
RNF40-211ENST00000567365 AJAP1Q9UKB5 411 aaPredicted RBP13.18□□□□□ -0.3
RNF40-211ENST00000567365 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
RNF40-211ENST00000567365 NUP210Q8TEM1 1887 aaPredicted RBP13.17□□□□□ -0.3
RNF40-211ENST00000567365 HHLA1C9JL84 531 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 TRIM66O15016 1216 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 CLSTN1O94985 981 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 ATP1A3P13637 1013 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 GJA1P17302 382 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 FCARP24071 287 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 GABRR2P28476 465 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 COPB1P53618 953 aaKnown RBP13.17□□□□□ -0.3
RNF40-211ENST00000567365 YWHAEP62258 255 aaKnown RBP13.17□□□□□ -0.3
RNF40-211ENST00000567365 HTR4Q13639 388 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 PPP1R26Q5T8A7 1209 aaPredicted RBP13.17□□□□□ -0.3
RNF40-211ENST00000567365 CYP4A22Q5TCH4 519 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 GJB7Q6PEY0 223 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 CLEC20AQ6ZU45 233 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 DENND5BQ6ZUT9 1274 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 SHC3Q92529 594 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
RNF40-211ENST00000567365 NAA15Q9BXJ9 866 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms