RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 MTF2Q9Y483 593 aaPredicted RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 PIAS3Q9Y6X2 628 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 RIF1Q5UIP0 2472 aaKnown RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 F5P12259 2224 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 GREB1Q4ZG55 1949 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 RALGAPA1Q6GYQ0 2036 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 CFAP54Q96N23 3096 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 PVALEFA0A1B0GWK0 134 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 CAPN5O15484 640 aaPredicted RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 DLATP10515 647 aaKnown RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 DDX6P26196 483 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 TARSP26639 723 aaKnown RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 CYP2J2P51589 502 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 CSTF1Q05048 431 aaKnown RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 TRPC3Q13507 836 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 MAPRE1Q15691 268 aaKnown RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 SNRNP35Q16560 246 aaKnown RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 ZNF528Q3MIS6 628 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 INTS6LQ5JSJ4 861 aaKnown RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 RESP18Q5W5W9 173 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 C4orf50Q6ZRC1 276 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 GAREM2Q75VX8 874 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 DPH6Q7L8W6 267 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 LRRTM3Q86VH5 581 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 WDR49Q8IV35 697 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 FSIP1Q8NA03 581 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 LEO1Q8WVC0 666 aaPredicted RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 MRPS31Q92665 395 aaKnown RBP11.11□□□□□ -0.63
LINC00564-201ENST00000567258 HPS3Q969F9 1004 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 IER2Q9BTL4 223 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 LRRC3Q9BY71 257 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 BLZF1Q9H2G9 400 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 ABCB6Q9NP58 842 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 EXOC1Q9NV70 894 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 OBP2AQ9NY56 170 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 ATP6V1DQ9Y5K8 247 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 R4GN57 208 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 ANAPC1Q9H1A4 1944 aa11.11□□□□□ -0.63
LINC00564-201ENST00000567258 PTPRDP23468 1912 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 CLIC2O15247 247 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 EXOC3O60645 756 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 PHACTR2O75167 634 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 JUNDP17535 347 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 ATF6P18850 670 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 ACAT1P24752 427 aaKnown RBP11.1□□□□□ -0.63
LINC00564-201ENST00000567258 CCNE1P24864 410 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 ANXA13P27216 316 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 NRLP54845 237 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 MLLT6P55198 1093 aaPredicted RBP11.1□□□□□ -0.63
LINC00564-201ENST00000567258 TNNC1P63316 161 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 KRT85P78386 507 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 CYP4F8P98187 520 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
LINC00564-201ENST00000567258 LRRC32Q14392 662 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 STXBP5Q5T5C0 1151 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 CC2D1AQ6P1N0 951 aaPredicted RBP11.1□□□□□ -0.63
LINC00564-201ENST00000567258 CBWD2Q8IUF1 395 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 SCN4BQ8IWT1 228 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 CELF5Q8N6W0 485 aaKnown RBP11.1□□□□□ -0.63
LINC00564-201ENST00000567258 MAB21L3Q8N8X9 362 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 EHBP1Q8NDI1 1231 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 GOLGA5Q8TBA6 731 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 BPIFB1Q8TDL5 484 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 SECISBP2LQ93073 1101 aaKnown RBP11.1□□□□□ -0.63
LINC00564-201ENST00000567258 EXOC4Q96A65 974 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 CLDN23Q96B33 292 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 CCDC127Q96BQ5 260 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 SPATA32Q96LK8 384 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 SNX25Q9H3E2 840 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 SLC39A2Q9NP94 309 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 AGPAT3Q9NRZ7 376 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 EHD2Q9NZN4 543 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 MAGEC2Q9UBF1 373 aaPredicted RBP11.1□□□□□ -0.63
LINC00564-201ENST00000567258 USP25Q9UHP3 1055 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 GTF3C4Q9UKN8 822 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 WASF2Q9Y6W5 498 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 COL4A3Q01955 1670 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 ATG2BQ96BY7 2078 aa11.1□□□□□ -0.63
LINC00564-201ENST00000567258 COL4A2P08572 1712 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 HELZP42694 1942 aaKnown RBP11.09□□□□□ -0.63
LINC00564-201ENST00000567258 WDR87Q6ZQQ6 2873 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 SOBPA7XYQ1 873 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 KIF20AO95235 890 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 SLFN14P0C7P3 912 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 WEE1P30291 646 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 AMPD2Q01433 879 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 GUCA2AQ02747 115 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 FCHO2Q0JRZ9 810 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 PSMD2Q13200 908 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 KNOP1Q1ED39 458 aaKnown RBP11.09□□□□□ -0.63
LINC00564-201ENST00000567258 EPM2AIP1Q7L775 607 aaPredicted RBP11.09□□□□□ -0.63
LINC00564-201ENST00000567258 TRAPPC11Q7Z392 1133 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 CMTM8Q8IZV2 173 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 GLIS3Q8NEA6 775 aa11.09□□□□□ -0.63
LINC00564-201ENST00000567258 OR5B17Q8NGF7 314 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms