RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 PABPC5Q96DU9 382 aaKnown RBP6.48□□□□□ -1.37
CDH13-209ENST00000567109 AGAP3Q96P47 875 aa6.48□□□□□ -1.37
CDH13-209ENST00000567109 STK33Q9BYT3 514 aa6.48□□□□□ -1.37
CDH13-209ENST00000567109 SLC9A2Q9UBY0 812 aa6.48□□□□□ -1.37
CDH13-209ENST00000567109 PLA2G4CQ9UP65 541 aa6.48□□□□□ -1.37
CDH13-209ENST00000567109 SMIM22K7EJ46 135 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 AGRPO00253 132 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ANGPT2O15123 496 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 BMP10O95393 424 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 TNNI3P19429 210 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 AKAP5P24588 427 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 SCRN1Q12765 414 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 PTPAQ15257 358 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 KDM7AQ6ZMT4 941 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ZBED8Q8IZ13 594 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 NUP93Q8N1F7 819 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 COLEC11Q9BWP8 271 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 APOL5Q9BWW9 433 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 PARVAQ9NVD7 372 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 NDOR1Q9UHB4 597 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ARID1BQ8NFD5 2236 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 DSG3P32926 999 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 TFDP2Q14188 446 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 MAPRE1Q15691 268 aaKnown RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 TBC1D25Q3MII6 688 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 PLEKHH3Q7Z736 793 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 FMR1NBQ8N0W7 255 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 PIK3R5Q8WYR1 880 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 CINPQ9BW66 212 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 REXO4Q9GZR2 422 aaKnown RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 TTC7AQ9ULT0 858 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 A0A0G2JND7 137 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 A0A1W2PQJ5 194 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 AREL1O15033 823 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 NR3C2P08235 984 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 KRT16P08779 473 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 PDGFRBP09619 1106 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 BACE1P56817 501 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 TGM3Q08188 693 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 TRIM65Q6PJ69 517 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 TRIM72Q6ZMU5 477 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 VN1R5Q7Z5H4 357 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ADGRA1Q86SQ6 560 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ATP11CQ8NB49 1132 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 SLC7A14Q8TBB6 771 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 FAM162AQ96A26 154 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 NUP85Q9BW27 656 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 HSPBP1Q9NZL4 362 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 AURKCQ9UQB9 309 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 URB1O60287 2271 aaKnown RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 SLC16A4O15374 487 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 HNRNPRO43390 633 aaKnown RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 URODP06132 367 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 FGRP09769 529 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 QARSP47897 775 aaKnown RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 EPHA7Q15375 998 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 TRADDQ15628 312 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 NLRP14Q86W24 1093 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 CROCCP3Q8IVE0 287 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 VPS50Q96JG6 964 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 GLIS2Q9BZE0 524 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 LNPEPQ9UIQ6 1025 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 MKL2Q9ULH7 1088 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 COQ6Q9Y2Z9 468 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 NUDT14O95848 222 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 GH1P01241 217 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ODC1P11926 461 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 PTPRAP18433 802 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 IRAK1P51617 712 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 USP11P51784 963 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ATN1P54259 1190 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 ANKRD13CQ8N6S4 541 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 MKL1Q969V6 931 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 FAR2Q96K12 515 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 AP1M1Q9BXS5 423 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ADNPQ9H2P0 1102 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 PARVBQ9HBI1 364 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 GID8Q9NWU2 228 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 GPN3Q9UHW5 284 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 NRBP1Q9UHY1 535 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 TUBE1Q9UJT0 475 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ZNF229Q9UJW7 825 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 L1RE1Q9UN81 338 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 RPLP2P05387 115 aaKnown RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 CTSEP14091 401 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 CDH2P19022 906 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 KLRC2P26717 231 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 MDH1P40925 334 aaKnown RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 PRMT2P55345 433 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 NPEPPSP55786 919 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 SGCGQ13326 291 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 PLD3Q8IV08 490 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 C17orf53Q8N3J3 647 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 RNF149Q8NC42 400 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 SPIRE2Q8WWL2 714 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 ATG4CQ96DT6 458 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 PNKPQ96T60 521 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 BBS2Q9BXC9 721 aa6.47□□□□□ -1.37
CDH13-209ENST00000567109 NHEJ1Q9H9Q4 299 aaPredicted RBP6.47□□□□□ -1.37
CDH13-209ENST00000567109 A0A1B0GTH6 734 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms