RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 PIK3CAP42336 1068 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 SOX9P48436 509 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 KPNA1P52294 538 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 SNRPFP62306 86 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 RPL10AP62906 217 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 NUCB2P80303 420 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 SMARCB1Q12824 385 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 PSMD2Q13200 908 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 ORC1Q13415 861 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 C4orf50Q6ZRC1 276 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 ARID3BQ8IVW6 561 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 MAB21L3Q8N8X9 362 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 PLEKHO2Q8TD55 490 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 DEPDC1BQ8WUY9 529 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 IRF7Q92985 503 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 RSPRY1Q96DX4 576 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 MED10Q9BTT4 135 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 BCO2Q9BYV7 579 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 GPR88Q9GZN0 384 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 DPEP3Q9H4B8 488 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 SMYD3Q9H7B4 428 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 LTB4R2Q9NPC1 389 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 CGNQ9P2M7 1197 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 PIAS3Q9Y6X2 628 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 MYOFQ9NZM1 2061 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 GFRA3O60609 400 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 MICAL2O94851 1124 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 KIF20AO95235 890 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 ABL1P00519 1130 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 CST3P01034 146 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 MYL1P05976 194 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 TRIM49P0CI25 452 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 TRIM49CP0CI26 452 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 WARSP23381 471 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 BDNFP23560 247 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 NR2F2P24468 414 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 TARSP26639 723 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 GNL1P36915 607 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 GRIK1P39086 918 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 DLG4P78352 724 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 PRKCQQ04759 706 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 DPYDQ12882 1025 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 NCOA4Q13772 614 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 ZNF667Q5HYK9 610 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 TDRD10Q5VZ19 366 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 TXNDC8Q6A555 127 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 PHLDB3Q6NSJ2 640 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 ZNF852Q6ZMS4 543 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 C12orf56Q8IXR9 622 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 ZNF516Q92618 1163 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 MRPS31Q92665 395 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 SYAP1Q96A49 352 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 EEF2KMTQ96G04 330 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 IRF2BPLQ9H1B7 796 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 KCTD10Q9H3F6 313 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 TASP1Q9H6P5 420 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 IL21Q9HBE4 155 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 PRM3Q9NNZ6 103 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 CRTAC1Q9NQ79 661 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 HSFX1Q9UBD0 423 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 MAGEC2Q9UBF1 373 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 CDH9Q9ULB4 789 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 PCDHGC3Q9UN70 934 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 R4GN57 208 aa10.8□□□□□ -0.68
GTF3C1-206ENST00000566779 PDXKO00764 312 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 RHOBTB3O94955 611 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 CKMP06732 381 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 CSH1P0DML2 217 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 CSH2P0DML3 217 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 KRT13P13646 458 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 GLULP15104 373 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 CCNE1P24864 410 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 ABL2P42684 1182 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 NLRP12P59046 1061 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 STARD6P59095 220 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 SPOPLQ6IQ16 392 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 DPH6Q7L8W6 267 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 MFSD6LQ8IWD5 586 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 FAM186BQ8IYM0 893 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 FAM3CQ92520 227 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 DNASE1L2Q92874 299 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 JAKMIP2Q96AA8 810 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 PKMYT1Q99640 499 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 GZF1Q9H116 711 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 ABCB6Q9NP58 842 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 MRPS17Q9Y2R5 130 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 RALGAPA1Q6GYQ0 2036 aa10.79□□□□□ -0.68
GTF3C1-206ENST00000566779 WDFY4Q6ZS81 3184 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 F8VP50 259 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 CLDN5O00501 218 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 GABRDO14764 452 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 LAMTOR5O43504 91 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 HMGA1P17096 107 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 GCLMP48507 274 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 VAMP7P51809 220 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 CDH8P55286 799 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 GUCA2AQ02747 115 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 TNK2Q07912 1038 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 KCNB1Q14721 858 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 MAPRE1Q15691 268 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms