RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 MAGEA9P43362 315 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 NUCB2P80303 420 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 FCHO2Q0JRZ9 810 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 ARHGAP29Q52LW3 1261 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 TDRD10Q5VZ19 366 aaKnown RBP13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 TXNDC8Q6A555 127 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 DCLK2Q8N568 766 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 CELF5Q8N6W0 485 aaKnown RBP13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 SUMF1Q8NBK3 374 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 BPIFB1Q8TDL5 484 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 SMG9Q9H0W8 520 aaKnown RBP13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 CRTAC1Q9NQ79 661 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 OBP2AQ9NY56 170 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 FBXO4Q9UKT5 387 aa13.22□□□□□ -0.29
KLHDC4-216ENST00000566561 COL4A3Q01955 1670 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 A8MXQ7 604 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 NOL4O94818 638 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 STAU1O95793 577 aaKnown RBP13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 C4BPAP04003 597 aaKnown RBP13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 FAM163BP0C2L3 166 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 PTPN1P18031 435 aaKnown RBP13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 DDX6P26196 483 aaKnown RBP eCLIP13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 ANXA13P27216 316 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 WEE1P30291 646 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 MAGEA11P43364 429 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 DLG4P78352 724 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 NCOA4Q13772 614 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 KCNB1Q14721 858 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 ZNF699Q32M78 642 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 ZNF667Q5HYK9 610 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 VSTM1Q6UX27 236 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 TMEM150AQ86TG1 271 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 TTC8Q8TAM2 541 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 TRMT2BQ96GJ1 504 aaKnown RBP13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 PCED1BQ96HM7 432 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 ZFYVE19Q96K21 471 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 CNTNAP3BQ96NU0 1288 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 LRRC3BQ96PB8 259 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 CNTNAP3Q9BZ76 1288 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 XYLT2Q9H1B5 865 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 C8orf33Q9H7E9 229 aaPredicted RBP13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 PCDHGA2Q9Y5H1 932 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 SCN1AP35498 2009 aa13.21□□□□□ -0.29
KLHDC4-216ENST00000566561 F5P12259 2224 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 SHISA7A6NL88 538 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 ARNTLO00327 626 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 NR2F2P24468 414 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 RPS9P46781 194 aaKnown RBP13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 SOX9P48436 509 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 CLDN10P78369 228 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 LMNB2Q03252 620 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 SCARA5Q6ZMJ2 495 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 GUF1Q8N442 669 aaKnown RBP13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 TTC16Q8NEE8 873 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 TMEM174Q8WUU8 243 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 ATRIPQ8WXE1 791 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 CLDN23Q96B33 292 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 MSANTD3Q96H12 275 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 MYRFLQ96LU7 910 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 DPEP3Q9H4B8 488 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 GTSE1Q9NYZ3 720 aa13.2□□□□□ -0.3
KLHDC4-216ENST00000566561 SOBPA7XYQ1 873 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 PRR5-ARHGAP8B1AHC4 643 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 TRIM66O15016 1216 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 KRT13P13646 458 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 P4HA1P13674 534 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 RPL13P26373 211 aaKnown RBP13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 PIK3CAP42336 1068 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 VAMP7P51809 220 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 CDH8P55286 799 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 ARHGAP8P85298 464 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 CSTF1Q05048 431 aaKnown RBP13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 FZD5Q13467 585 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 SGSM1Q2NKQ1 1148 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 CC2D1AQ6P1N0 951 aaPredicted RBP13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 C1orf228Q6PIY5 440 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 DENND5BQ6ZUT9 1274 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 B3GALNT2Q8NCR0 500 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 ELMO3Q96BJ8 720 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 VRTNQ9H8Y1 702 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 KIF9Q9HAQ2 790 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 LMAN1LQ9HAT1 526 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 GKN1Q9NS71 199 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 CCL26Q9Y258 94 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms