RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 CTNNAL1Q9UBT7 734 aa9.78□□□□□ -0.84
BBS4-210ENST00000566400 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
BBS4-210ENST00000566400 PRKAG3Q9UGI9 489 aa9.78□□□□□ -0.84
BBS4-210ENST00000566400 C2CD2Q9Y426 696 aa9.78□□□□□ -0.84
BBS4-210ENST00000566400 C3orf70A6NLC5 250 aaPredicted RBP9.77□□□□□ -0.85
BBS4-210ENST00000566400 ZNF487B1APH4 448 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 HNRNPCL1O60812 293 aaKnown RBP9.77□□□□□ -0.85
BBS4-210ENST00000566400 ASMTLO95671 621 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 IFNB1P01574 187 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 SETSIPP0DME0 302 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 TXNP10599 105 aaKnown RBP9.77□□□□□ -0.85
BBS4-210ENST00000566400 MARK3P27448 753 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 CTCFP49711 727 aaPredicted RBP9.77□□□□□ -0.85
BBS4-210ENST00000566400 RASSF2P50749 326 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 ZNF143P52747 638 aaPredicted RBP9.77□□□□□ -0.85
BBS4-210ENST00000566400 RBP5P82980 135 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 CDC42EP1Q00587 391 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 OTUD4Q01804 1114 aaKnown RBP9.77□□□□□ -0.85
BBS4-210ENST00000566400 PPIL2Q13356 520 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 PDK2Q15119 407 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 PDK4Q16654 411 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 GALNTL6Q49A17 601 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 ATP13A4Q4VNC1 1196 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 DENND1BQ6P3S1 775 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 CCDC62Q6P9F0 684 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 SCARA5Q6ZMJ2 495 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 RFX6Q8HWS3 928 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 PALM2Q8IXS6 379 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 NAT8LQ8N9F0 302 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 ACTL9Q8TC94 416 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 LRRC8CQ8TDW0 803 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 USP6NLQ92738 828 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 HAUS1Q96CS2 278 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 TMEM121Q9BTD3 319 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 GPBP1L1Q9HC44 474 aaPredicted RBP9.77□□□□□ -0.85
BBS4-210ENST00000566400 KLHL11Q9NVR0 708 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.77□□□□□ -0.85
BBS4-210ENST00000566400 KCNH4Q9UQ05 1017 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 USH1CQ9Y6N9 552 aa9.77□□□□□ -0.85
BBS4-210ENST00000566400 IQANK1A0A1B0GTG1 560 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 POC1B-GALNT4F8VUJ3 575 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 GOLGA8SH3BPF8 625 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 ATP2C2O75185 946 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 SSTR3P32745 418 aaPredicted RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 ELF3P78545 371 aaPredicted RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 RNASELQ05823 741 aaKnown RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 INCA1Q0VD86 236 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 CYP4A22Q5TCH4 519 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 HHATQ5VTY9 493 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 FYB2Q5VWT5 728 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 ZDHHC17Q8IUH5 632 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 CYP4X1Q8N118 509 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 GDAP1Q8TB36 358 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 TBCBQ99426 244 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 CNPY3Q9BT09 278 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 ACSS3Q9H6R3 686 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 ZWILCHQ9H900 591 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 METTL5Q9NRN9 209 aaKnown RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 PNMA3Q9UL41 463 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 BARX2Q9UMQ3 279 aaPredicted RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 USP18Q9UMW8 372 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 FZD1Q9UP38 647 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 DERAQ9Y315 318 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 IKBKGQ9Y6K9 419 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 TTLL13PA6NNM8 815 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 M0QYV0 167 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 ZNF189O75820 626 aaPredicted RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 ARIH2O95376 493 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 C22orf31O95567 290 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 TRUB2O95900 331 aaKnown RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 ITGB3P05106 788 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 GSTA2P09210 222 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 STAG3L1P0CL83 205 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 CXCL8P10145 99 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 TAC1P20366 129 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 GPD1P21695 349 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 CA4P22748 312 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 APLP1P51693 650 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 HIRAP54198 1017 aaPredicted RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 YARSP54577 528 aaKnown RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 EIF3EP60228 445 aaKnown RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 CCNA1P78396 465 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 PPARDQ03181 441 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 PRKG1Q13976 671 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 TMEM132DQ14C87 1099 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 PCBP1Q15365 356 aaKnown RBP eCLIP9.76□□□□□ -0.85
BBS4-210ENST00000566400 BOLA3Q53S33 107 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 EEPD1Q7L9B9 569 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 C1orf127Q8N9H9 656 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.76□□□□□ -0.85
BBS4-210ENST00000566400 DENND1AQ8TEH3 1009 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 TEKT4Q8WW24 435 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 KLHL29Q96CT2 875 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 CYTH2Q99418 400 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 FAM118BQ9BPY3 351 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 TUBB6Q9BUF5 446 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 YY1AP1Q9H869 796 aa9.76□□□□□ -0.85
BBS4-210ENST00000566400 PRDM16Q9HAZ2 1276 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms