RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 PARVAQ9NVD7 372 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 HSFX1Q9UBD0 423 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 DPP7Q9UHL4 492 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 TTC7AQ9ULT0 858 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-207ENST00000566095 PCDHB5Q9Y5E4 795 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 GRID2IPA4D2P6 1211 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 TMCO5BA8MYB1 307 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 I3L4J1 428 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 XPO1O14980 1071 aaKnown RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 FGF18O76093 207 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 C1RP00736 705 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 CYP1A2P05177 515 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 CHRNB2P17787 502 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 ADORA2BP29275 332 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 BMPR1AP36894 532 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 SCNN1AP37088 669 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 SLC1A1P43005 524 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 MAGEA11P43364 429 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 NOP2P46087 812 aaKnown RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 PLA2G4AP47712 749 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 TUFMP49411 452 aaKnown RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 RPL10AP62906 217 aaKnown RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 DSG1Q02413 1049 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 MRPL58Q14197 206 aaKnown RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 ZNF268Q14587 947 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 CFAP221Q4G0U5 840 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 PPP1R26Q5T8A7 1209 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 FAM171BQ6P995 826 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 CD300LGQ6UXG3 332 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 MTERF4Q7Z6M4 381 aaKnown RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 MCOLN2Q8IZK6 566 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 SIX6OS1Q8N1H7 587 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 LRRC57Q8N9N7 239 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 SLC2A14Q8TDB8 520 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 RIN2Q8WYP3 895 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 TFAP2BQ92481 460 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 RABGGTAQ92696 567 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 C18orf8Q96DM3 657 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 PBKQ96KB5 322 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 TWNKQ96RR1 684 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 TGS1Q96RS0 853 aaKnown RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 SELENOOQ9BVL4 669 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 DUSP16Q9BY84 665 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 GPR62Q9BZJ7 368 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 LRRC4Q9HBW1 653 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 ST7Q9NRC1 585 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 FAM49BQ9NUQ9 324 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 CXXC1Q9P0U4 656 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 FNIP2Q9P278 1114 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 CTTNBP2NLQ9P2B4 639 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 MTRRQ9UBK8 725 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 CACNG4Q9UBN1 327 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 HMGXB4Q9UGU5 601 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 SNX12Q9UMY4 172 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 HYOU1Q9Y4L1 999 aa10.37□□□□□ -0.75
SF3B3-207ENST00000566095 TIMM13Q9Y5L4 95 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-207ENST00000566095 NT5C1B-RDH14C9J2C7 533 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 C5orf67F2Z3F1 127 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 AP1G2O75843 785 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 URI1O94763 535 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-207ENST00000566095 ITGB1P05556 798 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 ADH1AP07327 375 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 MMP8P22894 467 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 ACAT1P24752 427 aaKnown RBP10.36□□□□□ -0.75
SF3B3-207ENST00000566095 LMO2P25791 158 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 ELF1P32519 619 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 BMP8BP34820 402 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 GPD2P43304 727 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 EPHB4P54760 987 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 PSMC1P62191 440 aaKnown RBP10.36□□□□□ -0.75
SF3B3-207ENST00000566095 GPR17Q13304 367 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 PDCLQ13371 301 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 PLD1Q13393 1074 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 SMC1AQ14683 1233 aaKnown RBP10.36□□□□□ -0.75
SF3B3-207ENST00000566095 SLC39A12Q504Y0 691 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 MEI1Q5TIA1 1274 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 SLC8B1Q6J4K2 584 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 DNAJC24Q6P3W2 148 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 DCUN1D2Q6PH85 259 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 RTL10Q7L3V2 364 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 FAM35AQ86V20 835 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 OSTM1Q86WC4 334 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 PASD1Q8IV76 773 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 VPS52Q8N1B4 723 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 TPCN2Q8NHX9 752 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 CPA5Q8WXQ8 436 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 KCTD13Q8WZ19 329 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 ZNF592Q92610 1267 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 PPP2R3CQ969Q6 453 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 MYLPFQ96A32 169 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 PCED1BQ96HM7 432 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 PKNOX2Q96KN3 472 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 LMAN2LQ9H0V9 348 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 DPEP3Q9H4B8 488 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 FBXO44Q9H4M3 255 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 NGRNQ9NPE2 291 aaKnown RBP10.36□□□□□ -0.75
SF3B3-207ENST00000566095 CHST7Q9NS84 486 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 KRT82Q9NSB4 513 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms