RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ECE1P42892 770 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 JAM2P57087 298 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 NSUN2Q08J23 767 aaKnown RBP eCLIP3.04□□□□□ -1.92
CHD9-218ENST00000566029 PPP2R5DQ14738 602 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SPCS2Q15005 226 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TMC7Q7Z402 723 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TDRPQ86YL5 185 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 OR6Y1Q8NGX8 325 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TMEM120AQ9BXJ8 343 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GCOM2Q9BZD3 368 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 SENP6Q9GZR1 1112 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 CCDC68Q9H2F9 335 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 S100A14Q9HCY8 104 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 EDARQ9UNE0 448 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 B3GNT3Q9Y2A9 372 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TNFRSF10AO00220 468 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TSHRP16473 764 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 LVRNQ6Q4G3 990 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ZNF410Q86VK4 478 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 RNF135Q8IUD6 432 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 FBXO27Q8NI29 283 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 RAPGEF4Q8WZA2 1011 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 BORCS5Q969J3 196 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TMIGD2Q96BF3 282 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SPANXDQ9BXN6 97 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 LRRC19Q9H756 370 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 VPS45Q9NRW7 570 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SELENONQ9NZV5 590 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 KLHL3Q9UH77 587 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PPM1HQ9ULR3 514 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SUGT1Q9Y2Z0 365 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PCDHGA11Q9Y5H2 935 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ADGRA3Q8IWK6 1321 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MYMKA6NI61 221 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 KMOO15229 486 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PRPF4O43172 522 aaKnown RBP eCLIP3.04□□□□□ -1.928e-7■□□□□ 10.5
CHD9-218ENST00000566029 JRKO75564 520 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PPM1BO75688 479 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CRTAMO95727 393 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GALCP54803 685 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CTAG1AP78358 180 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 FKBP4Q02790 459 aaKnown RBP eCLIP3.04□□□□□ -1.921e-6■■■■■ 33.9
CHD9-218ENST00000566029 PUDPQ08623 228 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 FBXL19Q6PCT2 694 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CCDC106Q9BWC9 280 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ASIC3Q9UHC3 531 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 HBS1LQ9Y450 684 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 E2F3O00716 465 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TOM1L1O75674 476 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SEMA3DO95025 777 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PGM3O95394 542 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TTC4O95801 387 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GLP2RO95838 553 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TUBA1BP68363 451 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TRIM32Q13049 653 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 RNF111Q6ZNA4 994 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 NEK10Q6ZWH5 1172 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TUBA1AQ71U36 451 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PEX5LQ8IYB4 626 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 UBE2J2Q8N2K1 259 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 UXS1Q8NBZ7 420 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 FBXL18Q96ME1 805 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GOLPH3Q9H4A6 298 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TRPC7Q9HCX4 862 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GINM1Q9NU53 330 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ATAD3AQ9NVI7 634 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 HERC5Q9UII4 1024 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 RNF11Q9Y3C5 154 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MYOCOSA0A1B0GUC4 107 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ARHGAP10A1A4S6 786 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ERVV-2B6SEH9 535 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ZNF213O14771 459 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GGPS1O95749 300 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 APOA4P06727 396 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PABPC1P11940 636 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 CDH2P19022 906 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 FGFR4P22455 802 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ADD2P35612 726 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 VCPP55072 806 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 NAA20P61599 178 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MYBPC1Q00872 1141 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CYP1B1Q16678 543 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TAF1BQ53T94 588 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 TMEM63BQ5T3F8 832 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 KRT80Q6KB66 452 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TMEM214Q6NUQ4 689 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 ISLR2Q6UXK2 745 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ARHGEF26Q96DR7 871 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ADNPQ9H2P0 1102 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 NEU2Q9Y3R4 380 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SPAG7O75391 227 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ADAMTS2O95450 1211 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 FDFT1P37268 417 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 OVGP1Q12889 678 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 MOGQ16653 247 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 SLC35G1Q2M3R5 365 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 SYDE1Q6ZW31 735 aaPredicted RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 POU5F2Q8N7G0 328 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 BTN2A2Q8WVV5 523 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 NSMCE3Q96MG7 304 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms