RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 ZSWIM3Q96MP5 696 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 PLA2G2FQ9BZM2 168 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 NIF3L1Q9GZT8 377 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 USP34Q70CQ2 3546 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 KANSL1LA0AUZ9 987 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 MAN2B1O00754 1011 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 NCAM2O15394 837 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 COL4A2P08572 1712 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 HMGA1P17096 107 aaKnown RBP13.09□□□□□ -0.31
SPG7-211ENST00000565370 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
SPG7-211ENST00000565370 VIPR2P41587 438 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 MAGEA9P43362 315 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 GCLMP48507 274 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 UBXN2BQ14CS0 331 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 ZNF852Q6ZMS4 543 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 DENND5BQ6ZUT9 1274 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 FAM35AQ86V20 835 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 UNC93AQ86WB7 457 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 CCDC105Q8IYK2 499 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 CELF5Q8N6W0 485 aaKnown RBP13.09□□□□□ -0.31
SPG7-211ENST00000565370 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
SPG7-211ENST00000565370 MYRFLQ96LU7 910 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 DPEP3Q9H4B8 488 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 TRPC7Q9HCX4 862 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 TRPV5Q9NQA5 729 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 THG1LQ9NWX6 298 aaKnown RBP13.09□□□□□ -0.31
SPG7-211ENST00000565370 SIT1Q9Y3P8 196 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 DENND4CQ5VZ89 1909 aa13.09□□□□□ -0.31
SPG7-211ENST00000565370 BICDL2A1A5D9 508 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 CHADO15335 359 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 PRAMEF12O95522 483 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 F11P03951 625 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 CKMP06732 381 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 CCNE1P24864 410 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 ASPAP45381 313 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 FCHO2Q0JRZ9 810 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 CMTM8Q8IZV2 173 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 TTC39CQ8N584 583 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 DTWD2Q8NBA8 298 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 BPIFB1Q8TDL5 484 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 TAS1R2Q8TE23 839 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 SMARCD1Q96GM5 515 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 DHTKD1Q96HY7 919 aaPredicted RBP13.08□□□□□ -0.32
SPG7-211ENST00000565370 C8orf48Q96LL4 319 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 BCO2Q9BYV7 579 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 OSBPL6Q9BZF3 934 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 CYP3A43Q9HB55 503 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 LTB4R2Q9NPC1 389 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
SPG7-211ENST00000565370 HEBP1Q9NRV9 189 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 MAN1B1Q9UKM7 699 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 PIAS3Q9Y6X2 628 aa13.08□□□□□ -0.32
SPG7-211ENST00000565370 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
SPG7-211ENST00000565370 ZNF638Q14966 1978 aaKnown RBP13.07□□□□□ -0.32
SPG7-211ENST00000565370 TRAV19A0A0A6YYK7 116 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 F8VP50 259 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 GADD45BO75293 160 aaPredicted RBP13.07□□□□□ -0.32
SPG7-211ENST00000565370 USP17L7P0C7H9 530 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 GLULP15104 373 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 PPP3CCP48454 512 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 PPP3CAQ08209 521 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 TCF15Q12870 199 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 CCDC40Q4G0X9 1142 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 WDR44Q5JSH3 913 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 C1orf220Q5T0J3 134 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 SPOPLQ6IQ16 392 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 KLHL10Q6JEL2 608 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 POTEHQ6S545 545 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 ZC3H3Q8IXZ2 948 aaKnown RBP13.07□□□□□ -0.32
SPG7-211ENST00000565370 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 TRIML1Q8N9V2 468 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 FBXL13Q8NEE6 735 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 ATOH1Q92858 354 aaPredicted RBP13.07□□□□□ -0.32
SPG7-211ENST00000565370 EEF2KMTQ96G04 330 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 FAXDC2Q96IV6 333 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 CEP63Q96MT8 703 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 SLITRK1Q96PX8 696 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 NELL2Q99435 816 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 DDX23Q9BUQ8 820 aaKnown RBP13.07□□□□□ -0.32
SPG7-211ENST00000565370 FOXQ1Q9C009 403 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 ZNF518BQ9C0D4 1074 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 METTL14Q9HCE5 456 aaKnown RBP13.07□□□□□ -0.32
SPG7-211ENST00000565370 KRT82Q9NSB4 513 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 TDP1Q9NUW8 608 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 TRPM5Q9NZQ8 1165 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 ARMCX3Q9UH62 379 aaPredicted RBP13.07□□□□□ -0.32
SPG7-211ENST00000565370 HELZP42694 1942 aaKnown RBP13.07□□□□□ -0.32
SPG7-211ENST00000565370 NCANO14594 1321 aa13.07□□□□□ -0.32
SPG7-211ENST00000565370 CACNA1HO95180 2353 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 TRIM49BA6NDI0 452 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 TADA3O75528 432 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms