RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 TCHPQ9BT92 498 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 TBC1D10AQ9BXI6 508 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 MRPL4Q9BYD3 311 aaKnown RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 VPS11Q9H270 941 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 C10orf88Q9H8K7 445 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 SAR1AQ9NR31 198 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 NKX1-2Q9UD57 310 aaPredicted RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 RPL26L1Q9UNX3 145 aaKnown RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 FER1L6Q2WGJ9 1857 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 SIP14410 1827 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 IGKV6D-21A0A0A0MT36 114 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 TTLL13PA6NNM8 815 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 TOM1L1O75674 476 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 LUC7L3O95232 432 aaKnown RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 EGFRP00533 1210 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 DPEP1P16444 411 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 KDELR1P24390 212 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 PTPN4P29074 926 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 EPHB2P29323 1055 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 ASPAP45381 313 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 EFNA5P52803 228 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 HMGCS2P54868 508 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 ZNF280AP59817 542 aaPredicted RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 YWHAEP62258 255 aaKnown RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 RNASELQ05823 741 aaKnown RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 SURF1Q15526 300 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 TARBP2Q15633 366 aaKnown RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 ZNF699Q32M78 642 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 BBS9Q3SYG4 887 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 KCNT1Q5JUK3 1230 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 PDIK1LQ8N165 341 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 ARFGAP1Q8N6T3 406 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 KCNV2Q8TDN2 545 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 STK32AQ8WU08 396 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 MAF1Q9H063 256 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 PICK1Q9NRD5 415 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 NRBP2Q9NSY0 501 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 XPO7Q9UIA9 1087 aaKnown RBP7.61□□□□□ -1.19
SMG1-210ENST00000565224 LNPEPQ9UIQ6 1025 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 WDR81Q562E7 1941 aa7.61□□□□□ -1.19
SMG1-210ENST00000565224 TCRBV7S3A2A0A539 114 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 WDR91A4D1P6 747 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 LIN7AO14910 233 aaPredicted RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 OGTO15294 1046 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 MSCO60682 206 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 TMEM63AO94886 807 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 PTPRAP18433 802 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 PSMC1P62191 440 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 TFAMQ00059 246 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 TAF11Q15544 211 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 PLEKHG4Q58EX7 1191 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 NBPF12Q5TAG4 269 aaPredicted RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 DCAF15Q66K64 600 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 CLNKQ7Z7G1 428 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 MTDHQ86UE4 582 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 RFX6Q8HWS3 928 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 ZNF276Q8N554 614 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 TAB3Q8N5C8 712 aaPredicted RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 ENDOVQ8N8Q3 282 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 JOSD2Q8TAC2 188 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 SH3TC2Q8TF17 1288 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 NUDCD1Q96RS6 583 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 CYTH2Q99418 400 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 LHX5Q9H2C1 402 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 TLE6Q9H808 572 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 MANSC1Q9H8J5 431 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 SLC17A7Q9P2U7 560 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 CPSF3Q9UKF6 684 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 BRCA1P38398 1863 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 IQANK1A0A1B0GTG1 560 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 GOLGA8RI6L899 631 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 APOC4-APOC2K7ER74 178 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 MCF2LO15068 1137 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 MED7O43513 233 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 MAFO75444 373 aaPredicted RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 PIAS1O75925 651 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 ECM2O94769 699 aaPredicted RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 TNNC2P02585 160 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 APOC2P02655 101 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 MT-ND3P03897 115 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 CD48P09326 243 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 HOXC6P09630 235 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 TPBGLP0DKB5 382 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 CD19P15391 556 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 GM2AP17900 193 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 UBA1P22314 1058 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 PAX7P23759 505 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 MARK3P27448 753 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 EIF3EP60228 445 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 BASP1P80723 227 aaKnown RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 CTC1Q2NKJ3 1217 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 FAM160B1Q5W0V3 765 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 CDCA2Q69YH5 1023 aaPredicted RBP7.6□□□□□ -1.19
SMG1-210ENST00000565224 CATSPERGQ6ZRH7 1159 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 UNC45BQ8IWX7 931 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 KIAA0319LQ8IZA0 1049 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 FAM71DQ8N9W8 422 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 KCTD6Q8NC69 237 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 RFWD2Q8NHY2 731 aa7.6□□□□□ -1.19
SMG1-210ENST00000565224 PRPF31Q8WWY3 499 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms