RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 O00370 1275 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 MICAL2O94851 1124 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 CFHP08603 1231 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 DNAJB1P25685 340 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 CTNNB1P35222 781 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 VAV2P52735 878 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 VCPP55072 806 aaKnown RBP11.75□□□□□ -0.53
SF3B3-205ENST00000564899 YWHAHQ04917 246 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-205ENST00000564899 STILQ15468 1287 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 CNGA2Q16280 664 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 GOLGA7BQ2TAP0 167 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 C10orf76Q5T2E6 689 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 FAM171A1Q5VUB5 890 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 DENND1BQ6P3S1 775 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-205ENST00000564899 ADGRD2Q7Z7M1 963 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 THEM5Q8N1Q8 247 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 TXLNBQ8N3L3 684 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 C12orf29Q8N999 325 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 COLGALT1Q8NBJ5 622 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 B3GALNT2Q8NCR0 500 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 EDAQ92838 391 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 CYFIP2Q96F07 1278 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 IGSF21Q96ID5 467 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 PPP1R13BQ96KQ4 1090 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 RTP3Q9BQQ7 232 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 GPR62Q9BZJ7 368 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 IGFLR1Q9H665 355 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 FAM49BQ9NUQ9 324 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 TAS2R14Q9NYV8 317 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 CDH9Q9ULB4 789 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.75□□□□□ -0.53
SF3B3-205ENST00000564899 CEP83Q9Y592 693 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 PCDHGC5Q9Y5F6 944 aa11.75□□□□□ -0.53
SF3B3-205ENST00000564899 FAM170AA1A519 330 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 GOLGA6L9A6NEM1 432 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 TMEM221A6NGB7 291 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 USP27XA6NNY8 438 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 ESPNB1AK53 854 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 M0QYV0 167 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 M0R296 226 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 LSM8O95777 96 aaKnown RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 CYP1A1P04798 512 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 H2AFZP0C0S5 128 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 GZMAP12544 262 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 UNGP13051 313 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 CCDC130P13994 396 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 PTPN1P18031 435 aaKnown RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 FGFR3P22607 806 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 PPM1AP35813 382 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 NSFP46459 744 aaKnown RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 NOMO3P69849 1222 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 RBM10P98175 930 aaKnown RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 TSPY1Q01534 308 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 MDH1BQ5I0G3 518 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 INTS6LQ5JSJ4 861 aaKnown RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 VARS2Q5ST30 1063 aaKnown RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 KIAA0319Q5VV43 1072 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 NAA35Q5VZE5 725 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 LCLAT1Q6UWP7 414 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 H2AFVQ71UI9 128 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 CEP57Q86XR8 500 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 TMEM35BQ8NCS4 154 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 C1orf131Q8NDD1 294 aaKnown RBP11.74□□□□□ -0.53
SF3B3-205ENST00000564899 TMEM169Q96HH4 297 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 LPIN3Q9BQK8 851 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 ACBD6Q9BR61 282 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 KCND1Q9NSA2 647 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 SPG21Q9NZD8 308 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 HESX1Q9UBX0 185 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 TSPAN16Q9UKR8 245 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 FRYLO94915 3013 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 GVINP1Q7Z2Y8 2422 aa11.74□□□□□ -0.53
SF3B3-205ENST00000564899 A0A0U1RQJ8 604 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 RCCD1A6NED2 376 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 C5orf67F2Z3F1 127 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 ATP8B3O60423 1300 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 ATP2C2O75185 946 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 RTN2O75298 545 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 OAZ2O95190 189 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 FTLP02792 175 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-205ENST00000564899 ADORA2BP29275 332 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 CDH5P33151 784 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-205ENST00000564899 CENPCQ03188 943 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 KIF5AQ12840 1032 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 SMAD4Q13485 552 aaKnown RBP11.73□□□□□ -0.53
SF3B3-205ENST00000564899 CCDC142Q17RM4 750 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 ARHGAP29Q52LW3 1261 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 PPP1R26Q5T8A7 1209 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-205ENST00000564899 ACAD10Q6JQN1 1059 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 ZNF280DQ6N043 979 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 PPP1R2P3Q6NXS1 205 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 TRIM67Q6ZTA4 783 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 TAS1R1Q7RTX1 841 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 DNAAF5Q86Y56 855 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 REXO1L1PQ8IX06 675 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 OR10T2Q8NGX3 314 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms