RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 EBF3Q9H4W6 596 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 PARD6AQ9NPB6 346 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 R3HCC1Q9Y3T6 440 aaKnown RBP19.8■□□□□ 0.76
CLN6-204ENST00000564752 NUP210Q8TEM1 1887 aaPredicted RBP19.79■□□□□ 0.76
CLN6-204ENST00000564752 TRDMT1O14717 391 aaKnown RBP19.79■□□□□ 0.76
CLN6-204ENST00000564752 TGFB1I1O43294 461 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 TADA3O75528 432 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 TNNC2P02585 160 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 SDHBP21912 280 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 SYKP43405 635 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 CYP2J2P51589 502 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 SNRPFP62306 86 aaKnown RBP19.79■□□□□ 0.76
CLN6-204ENST00000564752 LMNB2Q03252 620 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 SIM2Q14190 667 aaPredicted RBP19.79■□□□□ 0.76
CLN6-204ENST00000564752 BMT2Q1RMZ1 405 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 TMEM196Q5HYL7 178 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 TRIM68Q6AZZ1 485 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 PRR23BQ6ZRT6 265 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 RIN3Q8TB24 985 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 KBTBD7Q8WVZ9 684 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 CHFRQ96EP1 664 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 USP18Q9UMW8 372 aa19.79■□□□□ 0.76
CLN6-204ENST00000564752 CLIC2O15247 247 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 KLRC4O43908 158 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 ATP2C2O75185 946 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 MYL1P05976 194 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 RETP07949 1114 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 LMO2P25791 158 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 MAGEA11P43364 429 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 SNRNP35Q16560 246 aaKnown RBP19.78■□□□□ 0.76
CLN6-204ENST00000564752 CC2D1AQ6P1N0 951 aaPredicted RBP19.78■□□□□ 0.76
CLN6-204ENST00000564752 WDR49Q8IV35 697 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 CYP2S1Q96SQ9 504 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 CGNQ9P2M7 1197 aaKnown RBP19.78■□□□□ 0.76
CLN6-204ENST00000564752 CDH9Q9ULB4 789 aa19.78■□□□□ 0.76
CLN6-204ENST00000564752 A0A1W2PQ27 194 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 A0A1W2PQ64 194 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 A0A1W2PQD8 194 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 ARSAP15289 507 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 HOXC13P31276 330 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 NDUFA8P51970 172 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 ATXN1P54253 815 aaKnown RBP19.77■□□□□ 0.76
CLN6-204ENST00000564752 AMPD2Q01433 879 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 GRSF1Q12849 480 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLN6-204ENST00000564752 SRSF5Q13243 272 aaKnown RBP19.77■□□□□ 0.76
CLN6-204ENST00000564752 PDGFRLQ15198 375 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 KNOP1Q1ED39 458 aaKnown RBP19.77■□□□□ 0.76
CLN6-204ENST00000564752 KMT5BQ4FZB7 885 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 HEATR6Q6AI08 1181 aaKnown RBP19.77■□□□□ 0.76
CLN6-204ENST00000564752 FSTL4Q6MZW2 842 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 C4orf50Q6ZRC1 276 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 TRAPPC11Q7Z392 1133 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 SCN4BQ8IWT1 228 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 FSIP1Q8NA03 581 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 XXYLT1Q8NBI6 393 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 RDH13Q8NBN7 331 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 SLC22A12Q96S37 553 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 SYT15Q9BQS2 421 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 GDPD2Q9HCC8 539 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 CRTAC1Q9NQ79 661 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 MAGEC2Q9UBF1 373 aaPredicted RBP19.77■□□□□ 0.76
CLN6-204ENST00000564752 NCOR2Q9Y618 2525 aa19.77■□□□□ 0.76
CLN6-204ENST00000564752 FAM237AA0A1B0GTK4 181 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 LRP3O75074 770 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 CST3P01034 146 aaPredicted RBP19.76■□□□□ 0.75
CLN6-204ENST00000564752 USP17L7P0C7H9 530 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 WARSP23381 471 aaKnown RBP19.76■□□□□ 0.75
CLN6-204ENST00000564752 FAM160A1Q05DH4 1040 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 SPEM2Q0P670 501 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 PKN3Q6P5Z2 889 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 VSTM1Q6UX27 236 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 WDR5BQ86VZ2 330 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 KIAA0895Q8NCT3 520 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 GOLGA5Q8TBA6 731 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 SPATA17Q96L03 361 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 FNBP1Q96RU3 617 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 TRPC7Q9HCX4 862 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 GCNT4Q9P109 453 aa19.76■□□□□ 0.75
CLN6-204ENST00000564752 TRAV19A0A0A6YYK7 116 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 PDGFRBP09619 1106 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 DLATP10515 647 aaKnown RBP19.75■□□□□ 0.75
CLN6-204ENST00000564752 GALK1P51570 392 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 PSMC1P62191 440 aaKnown RBP19.75■□□□□ 0.75
CLN6-204ENST00000564752 STK4Q13043 487 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 PSMD2Q13200 908 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 MTF1Q14872 753 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 MAPRE1Q15691 268 aaKnown RBP19.75■□□□□ 0.75
CLN6-204ENST00000564752 ZNF77Q15935 545 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 C12orf56Q8IXR9 622 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 OSCP1Q8WVF1 389 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 MYLPFQ96A32 169 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 CCDC47Q96A33 483 aaKnown RBP19.75■□□□□ 0.75
CLN6-204ENST00000564752 CEP295NLQ96MC4 621 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 MMS19Q96T76 1030 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 ECT2Q9H8V3 914 aa19.75■□□□□ 0.75
CLN6-204ENST00000564752 FBRSL1Q9HCM7 1045 aaKnown RBP19.75■□□□□ 0.75
CLN6-204ENST00000564752 EXOC3O60645 756 aa19.74■□□□□ 0.75
CLN6-204ENST00000564752 ATG13O75143 517 aa19.74■□□□□ 0.75
CLN6-204ENST00000564752 RPN1P04843 607 aaKnown RBP19.74■□□□□ 0.75
CLN6-204ENST00000564752 FAM163BP0C2L3 166 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms