RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CERS4Q9HA82 394 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SLC28A3Q9HAS3 691 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 C11orf16Q9NQ32 467 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ST7Q9NRC1 585 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TMEM161AQ9NX61 479 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ITGA11Q9UKX5 1188 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NFU1Q9UMS0 254 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 INPP5FQ9Y2H2 1132 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 UTP11Q9Y3A2 253 aaKnown RBP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 INSL6Q9Y581 213 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PCDHA3Q9Y5H8 950 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 KIAA1671Q9BY89 1806 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 A0A0U1RQF3 1178 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZSCAN5CA6NGD5 496 aaPredicted RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MEIS3P2A8K0S8 358 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PSTPIP1O43586 416 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 OPA1O60313 960 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PROSCO94903 275 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ARHGEF15O94989 841 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CST3P01034 146 aaPredicted RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PAEPP09466 180 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SKIP12755 728 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CD19P15391 556 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FOSL2P15408 326 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ATF7P17544 494 aaPredicted RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 BRD2P25440 801 aaKnown RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GBP1P32455 592 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MAN1A1P33908 653 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GRM5P41594 1212 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CARSP49589 748 aaKnown RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PEX5P50542 639 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DR1Q01658 176 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TAP1Q03518 808 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GRIN2CQ14957 1233 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 UBXN11Q5T124 520 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ALS2CLQ60I27 953 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PLEKHA7Q6IQ23 1121 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DNAJC24Q6P3W2 148 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SLC27A1Q6PCB7 646 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SPRED2Q7Z698 418 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SLC13A5Q86YT5 568 aaPredicted RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TMEM192Q8IY95 271 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HACE1Q8IYU2 909 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FIBCD1Q8N539 461 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MREGQ8N565 214 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TTC39CQ8N584 583 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 C1orf127Q8N9H9 656 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 C1orf131Q8NDD1 294 aaKnown RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZNF606Q8WXB4 792 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 LRRC45Q96CN5 670 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PGBD4Q96DM1 585 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 BTBD6Q96KE9 485 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ACAP3Q96P50 834 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ASB2Q96Q27 587 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HINFPQ9BQA5 517 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 BCO2Q9BYV7 579 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 XYLT2Q9H1B5 865 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NXF3Q9H4D5 531 aaKnown RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PLEKHA4Q9H4M7 779 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FAM124BQ9H5Z6 455 aaPredicted RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZNF576Q9H609 170 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ELAC1Q9H777 363 aaKnown RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CYP3A43Q9HB55 503 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PARVAQ9NVD7 372 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PARP2Q9UGN5 583 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CHORDC1Q9UHD1 332 aaPredicted RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 IP6K2Q9UHH9 426 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 AMACRQ9UHK6 382 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 STRIP2Q9ULQ0 834 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PCDHGC3Q9UN70 934 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 POLIQ9UNA4 740 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 C2CD2Q9Y426 696 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HES2Q9Y543 173 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 IPPQ9Y573 584 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TDRD15B5MCY1 1934 aaKnown RBP7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MYO15AQ9UKN7 3530 aa7.85□□□□□ -1.15
MAP1LC3B-205ENST00000564638 A0A1B0GUA9 196 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 LINC01553A4QN01 128 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 BHMG1C9JSJ3 638 aaPredicted RBP7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TTI1O43156 1089 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HOXA2O43364 376 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DGKIO75912 1065 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CSPG5O95196 566 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 STAU1O95793 577 aaKnown RBP7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 EOMESO95936 686 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ITGB3P05106 788 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 WEE2P0C1S8 567 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PYGMP11217 842 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MMP8P22894 467 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 AKAP5P24588 427 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 POLR2BP30876 1174 aaKnown RBP7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CDH5P33151 784 aaPredicted RBP7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CTNNB1P35222 781 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HSPA9P38646 679 aaKnown RBP7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CETN2P41208 172 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FNTAP49354 379 aa7.84□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GUCY2FP51841 1108 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms