RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 FAM124BQ9H5Z6 455 aaPredicted RBP14.27□□□□□ -0.13
CLK3-216ENST00000564468 TASP1Q9H6P5 420 aa14.27□□□□□ -0.13
CLK3-216ENST00000564468 ZNF334Q9HCZ1 680 aaPredicted RBP14.27□□□□□ -0.13
CLK3-216ENST00000564468 MAGED2Q9UNF1 606 aaPredicted RBP14.27□□□□□ -0.13
CLK3-216ENST00000564468 KMT2EQ8IZD2 1858 aa14.27□□□□□ -0.13
CLK3-216ENST00000564468 SLC38A8A6NNN8 435 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 DPYSL4O14531 572 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 NOL4O94818 638 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 BMP6P22004 513 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 BDNFP23560 247 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 WEE1P30291 646 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 GPC5P78333 572 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 GPR158Q5T848 1215 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 TANGO2Q6ICL3 276 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 TTI2Q6NXR4 508 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 SIX5Q8N196 739 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 GPR152Q8TDT2 470 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 TAS1R2Q8TE23 839 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 MRPS31Q92665 395 aaKnown RBP14.26□□□□□ -0.13
CLK3-216ENST00000564468 MYRFLQ96LU7 910 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 RPP25Q9BUL9 199 aaKnown RBP14.26□□□□□ -0.13
CLK3-216ENST00000564468 TRMT61BQ9BVS5 477 aaKnown RBP14.26□□□□□ -0.13
CLK3-216ENST00000564468 BCO2Q9BYV7 579 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 NIF3L1Q9GZT8 377 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 OBP2AQ9NY56 170 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 CTNND2Q9UQB3 1225 aa14.26□□□□□ -0.13
CLK3-216ENST00000564468 STK25O00506 426 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 F11P03951 625 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 HMGA1P17096 107 aaKnown RBP14.25□□□□□ -0.13
CLK3-216ENST00000564468 PSMC3P17980 439 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 ASPAP45381 313 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 GPR15P49685 360 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 CLCN5P51795 746 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 NLRP12P59046 1061 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 CETN1Q12798 172 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 SPOPLQ6IQ16 392 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 ERMP1Q7Z2K6 904 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 MFSD6LQ8IWD5 586 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 YAF2Q8IY57 180 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 ST13P5Q8NFI4 369 aaPredicted RBP14.25□□□□□ -0.13
CLK3-216ENST00000564468 IRF7Q92985 503 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 C8orf48Q96LL4 319 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 ZSWIM3Q96MP5 696 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 MED10Q9BTT4 135 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 CLSTN2Q9H4D0 955 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 BRD9Q9H8M2 597 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 IL21Q9HBE4 155 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 VPS13AQ96RL7 3174 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 FAM186AA6NE01 2351 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 TICRRQ7Z2Z1 1910 aa14.25□□□□□ -0.13
CLK3-216ENST00000564468 HELZP42694 1942 aaKnown RBP14.24□□□□□ -0.13
CLK3-216ENST00000564468 CCDC192P0DO97 292 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 FCARP24071 287 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 AVPR1AP37288 418 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 PPP3CCP48454 512 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 PDE6CP51160 858 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 NDST1P52848 882 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 CYP4F8P98187 520 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 PRKCQQ04759 706 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 INCA1Q0VD86 236 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 CCDC142Q17RM4 750 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 SDHAF4Q5VUM1 108 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
CLK3-216ENST00000564468 PHLDB3Q6NSJ2 640 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 DENND5BQ6ZUT9 1274 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 ARID3BQ8IVW6 561 aaPredicted RBP14.24□□□□□ -0.13
CLK3-216ENST00000564468 MLKLQ8NB16 471 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 FLCNQ8NFG4 579 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 DNASE1L2Q92874 299 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 SLC35C1Q96A29 364 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 DUSP9Q99956 384 aaKnown RBP14.24□□□□□ -0.13
CLK3-216ENST00000564468 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 B3GNT5Q9BYG0 378 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 PLA2G2FQ9BZM2 168 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 SDCBP2Q9H190 292 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 NUP62CLQ9H1M0 184 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 ARHGEF3Q9NR81 526 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 RWDD2AQ9UIY3 292 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 CA14Q9ULX7 337 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 COQ4Q9Y3A0 265 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 WDR87Q6ZQQ6 2873 aa14.24□□□□□ -0.13
CLK3-216ENST00000564468 F5P12259 2224 aa14.23□□□□□ -0.13
CLK3-216ENST00000564468 HEPACAM2A8MVW5 462 aa14.23□□□□□ -0.13
CLK3-216ENST00000564468 F8VP50 259 aa14.23□□□□□ -0.13
CLK3-216ENST00000564468 NRG2O14511 850 aaPredicted RBP14.23□□□□□ -0.13
CLK3-216ENST00000564468 ZNF263O14978 683 aa14.23□□□□□ -0.13
CLK3-216ENST00000564468 PMM2O15305 246 aa14.23□□□□□ -0.13
CLK3-216ENST00000564468 P4HA2O15460 535 aa14.23□□□□□ -0.13
CLK3-216ENST00000564468 RTN3O95197 1032 aaPredicted RBP14.23□□□□□ -0.13
CLK3-216ENST00000564468 PDGFBP01127 241 aaPredicted RBP14.23□□□□□ -0.13
CLK3-216ENST00000564468 PFKLP17858 780 aa14.23□□□□□ -0.13
CLK3-216ENST00000564468 VIPR2P41587 438 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms