RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
TCF4-222ENST00000564228 CELF3Q5SZQ8 465 aaKnown RBP11.62□□□□□ -0.55
TCF4-222ENST00000564228 FAM91A1Q658Y4 838 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 ABHD15Q6UXT9 468 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 ACAD11Q709F0 780 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 MYLK4Q86YV6 388 aaPredicted RBP11.62□□□□□ -0.55
TCF4-222ENST00000564228 LRRC43Q8N309 656 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 KCTD17Q8N5Z5 321 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 USP6NLQ92738 828 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 CD101Q93033 1021 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 ATP6V0A1Q93050 837 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 SLC35C1Q96A29 364 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 MCUR1Q96AQ8 359 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 NSL1Q96IY1 281 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 TUBGCP5Q96RT8 1024 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 KATNBL1Q9H079 304 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 ABHD16BQ9H3Z7 469 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 ZHX3Q9H4I2 956 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 PTTG2Q9NZH5 202 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 GJD2Q9UKL4 321 aa11.62□□□□□ -0.55
TCF4-222ENST00000564228 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.62□□□□□ -0.55
TCF4-222ENST00000564228 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.61□□□□□ -0.55
TCF4-222ENST00000564228 ARHGEF35A5YM69 484 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 GYG2O15488 501 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 HAUS5O94927 633 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 GAS8O95995 478 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 HOXC6P09630 235 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 ABCB4P21439 1286 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 RFX1P22670 979 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 RPL13P26373 211 aaKnown RBP11.61□□□□□ -0.55
TCF4-222ENST00000564228 CHKAP35790 457 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 TCF7P36402 384 aaPredicted RBP11.61□□□□□ -0.55
TCF4-222ENST00000564228 KRT17Q04695 432 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 KIF22Q14807 665 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 KNOP1Q1ED39 458 aaKnown RBP11.61□□□□□ -0.55
TCF4-222ENST00000564228 BMT2Q1RMZ1 405 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 HSDL1Q3SXM5 330 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 PRAMEF19Q5SWL8 479 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 AADACL2Q6P093 401 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 KLC3Q6P597 504 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 C4orf19Q8IY42 314 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 ALDH16A1Q8IZ83 802 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 BBOF1Q8ND07 529 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 GRK7Q8WTQ7 553 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 KRT35Q92764 455 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 SPATA33Q96N06 139 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 ECSITQ9BQ95 431 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 RUSC1Q9BVN2 902 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 TRAIPQ9BWF2 469 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 THAP2Q9H0W7 228 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 PPCSQ9HAB8 311 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 SSU72Q9NP77 194 aaKnown RBP11.61□□□□□ -0.55
TCF4-222ENST00000564228 ZNF302Q9NR11 478 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 ZDHHC7Q9NXF8 308 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 GABRQQ9UN88 632 aa11.61□□□□□ -0.55
TCF4-222ENST00000564228 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 ZNF862O60290 1169 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 MAGEC1O60732 1142 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 PFDN1O60925 122 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 VAV1P15498 845 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 TNFAIP3P21580 790 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 IVDP26440 423 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 CD151P48509 253 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 PRKCEQ02156 737 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 GRM2Q14416 872 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 RASA2Q15283 850 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 PLA2G4FQ68DD2 849 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 RINT1Q6NUQ1 792 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 ADGRG6Q86SQ4 1221 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 SPATA24Q86W54 205 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 PIP4K2CQ8TBX8 421 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 SEPT1Q8WYJ6 367 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 CATSPER2Q96P56 530 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 REEP2Q9BRK0 252 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 SLCO1B3Q9NPD5 702 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 SSX2IPQ9Y2D8 614 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 DKC1O60832 514 aaKnown RBP eCLIP11.6□□□□□ -0.55
TCF4-222ENST00000564228 ATG7O95352 703 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 LYPLA2O95372 231 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 MARCKSL1P49006 195 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 RARRES1P49788 294 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 CLCN2P51788 898 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 NEK3P51956 506 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 CAP1Q01518 475 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 XKR9Q5GH70 373 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 DCAF17Q5H9S7 520 aaPredicted RBP11.6□□□□□ -0.55
TCF4-222ENST00000564228 OTOAQ7RTW8 1153 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 PHLDB2Q86SQ0 1253 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 MTDHQ86UE4 582 aaKnown RBP11.6□□□□□ -0.55
TCF4-222ENST00000564228 VPS52Q8N1B4 723 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 VTI1AQ96AJ9 217 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 GPR20Q99678 358 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 PLVAPQ9BX97 442 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 GPAMQ9HCL2 828 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 ANKFY1Q9P2R3 1169 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 ASIC3Q9UHC3 531 aa11.6□□□□□ -0.55
TCF4-222ENST00000564228 SEPT9Q9UHD8 586 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms