RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 FGAP02671 866 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 ACP1P24666 158 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 BRCC3P46736 316 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 NT5C2P49902 561 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 GRIN1Q05586 938 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 EID2Q8N6I1 236 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 TOE1Q96GM8 510 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 CPB2Q96IY4 423 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 PSTPIP2Q9H939 334 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 OSGEPQ9NPF4 335 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 TJP2Q9UDY2 1190 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 SATB2Q9UPW6 733 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 COL4A3BPQ9Y5P4 624 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 SLCO1B1Q9Y6L6 691 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 POLEQ07864 2286 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 A0A1W2PNU3 283 aaPredicted RBP11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 SYN3O14994 580 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 HOXB2P14652 356 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 TNFRSF4P43489 277 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 ALDH1A3P47895 512 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 UBE2SQ16763 222 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 SMTNL2Q2TAL5 461 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 CTXN3Q4LDR2 81 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 KCNT1Q5JUK3 1230 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 NIPA1Q7RTP0 329 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 TRMT11Q7Z4G4 463 aaKnown RBP11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 SGMS1Q86VZ5 419 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 C12orf40Q86WS4 652 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 TBC1D10CQ8IV04 446 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 MCEMP1Q8IX19 187 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 C3orf58Q8NDZ4 430 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 NSUN7Q8NE18 718 aaKnown RBP11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 KCNV2Q8TDN2 545 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 SAP25Q8TEE9 199 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 HTR3CQ8WXA8 447 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 GCNAQ96QF7 691 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 CRISPLD1Q9H336 500 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 PCDHGA4Q9Y5G9 962 aa11.71□□□□□ -0.53
HDGFL3-204ENST00000563790 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 RTN2O75298 545 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 CSO75390 466 aaKnown RBP11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 APODP05090 189 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 EIF2DP41214 584 aaKnown RBP11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 CLCNKBP51801 687 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 MLLT10P55197 1068 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 HAND2P61296 217 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 SRSF6Q13247 344 aaKnown RBP11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 ZNF77Q15935 545 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 UPP1Q16831 310 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 MTERF2Q49AM1 385 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 C3orf38Q5JPI3 329 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 ITIH5Q86UX2 942 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 HEATR4Q86WZ0 1026 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 TMEM57Q8N5G2 664 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 MAB21L3Q8N8X9 362 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 PRR11Q96HE9 360 aaPredicted RBP11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 MRGPRX1Q96LB2 322 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 LURAP1Q96LR2 239 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 PNKPQ96T60 521 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 RNF41Q9H4P4 317 aaPredicted RBP11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 ENTPD4Q9Y227 616 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 PCDHGA8Q9Y5G5 932 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 CROCCQ5TZA2 2017 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 ABCA4P78363 2273 aa11.7□□□□□ -0.54
HDGFL3-204ENST00000563790 ARHGAP10A1A4S6 786 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 NOBOXO60393 691 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 NFATC1O95644 943 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 LDLRP01130 860 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 ITGAVP06756 1048 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 SRGAP2CP0DJJ0 459 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 CPB1P15086 417 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 DDX6P26196 483 aaKnown RBP eCLIP11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 POLE2P56282 527 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 DUSP4Q13115 394 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 UGCGQ16739 394 aa11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 METTL3Q86U44 580 aaKnown RBP11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 IPO4Q8TEX9 1081 aaKnown RBP11.69□□□□□ -0.54
HDGFL3-204ENST00000563790 MYMKA6NI61 221 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 WIPF1O43516 503 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 LZTS3O60299 673 aaPredicted RBP11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 ABCB4P21439 1286 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 GRIA2P42262 883 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 CYP4F2P78329 520 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 NCBP1Q09161 790 aaKnown RBP11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 ZNF280DQ6N043 979 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 BORAQ6PGQ7 559 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 SV2AQ7L0J3 742 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 CXXC5Q7LFL8 322 aaKnown RBP11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 ZSCAN1Q8NBB4 408 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 SPOCK2Q92563 424 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 HPS3Q969F9 1004 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 CXCL16Q9H2A7 254 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 TM9SF3Q9HD45 589 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 TBC1D22BQ9NU19 505 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 TCEAL9Q9UHQ7 104 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms